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This page was generated on 2022-01-21 13:07:13 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for TFEA.ChIP on tokay2


To the developers/maintainers of the TFEA.ChIP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TFEA.ChIP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1947/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TFEA.ChIP 1.14.0  (landing page)
Laura Puente SantamarĂ­a
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/TFEA.ChIP
git_branch: RELEASE_3_14
git_last_commit: 42c4ce4
git_last_commit_date: 2021-10-26 12:40:40 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: TFEA.ChIP
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TFEA.ChIP_1.14.0.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.14.0.zip && rm TFEA.ChIP_1.14.0.tar.gz TFEA.ChIP_1.14.0.zip
StartedAt: 2022-01-20 06:41:13 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 06:42:49 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 95.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TFEA.ChIP_1.14.0.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.14.0.zip && rm TFEA.ChIP_1.14.0.tar.gz TFEA.ChIP_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 79 3844k   79 3052k    0     0  3972k      0 --:--:-- --:--:-- --:--:-- 3973k
100 3844k  100 3844k    0     0  4226k      0 --:--:-- --:--:-- --:--:-- 4224k

install for i386

* installing *source* package 'TFEA.ChIP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TFEA.ChIP'
    finding HTML links ... done
    ARNT.metadata                           html  
    ARNT.peaks.bed                          html  
    DnaseHS_db                              html  
    Entrez.gene.IDs                         html  
    GR2tfbs_db                              html  
    GSEA.result                             html  
    GSEA_ESpermutations                     html  
    GSEA_EnrichmentScore                    html  
    GSEA_run                                html  
    GeneID2entrez                           html  
    Genes.Upreg                             html  
    Mat01                                   html  
    MetaData                                html  
    Select_genes                            html  
    contingency_matrix                      html  
    getCMstats                              html  
    get_LFC_bar                             html  
    get_chip_index                          html  
    gr.list                                 html  
    highlight_TF                            html  
    hypoxia                                 html  
    hypoxia_DESeq                           html  
    log2.FC                                 html  
    makeTFBSmatrix                          html  
    plot_CM                                 html  
    plot_ES                                 html  
    plot_RES                                html  
    preprocessInputData                     html  
    rankTFs                                 html  
    set_user_data                           html  
    tfbs.database                           html  
    txt2GR                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TFEA.ChIP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TFEA.ChIP' as TFEA.ChIP_1.14.0.zip
* DONE (TFEA.ChIP)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TFEA.ChIP' successfully unpacked and MD5 sums checked