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This page was generated on 2022-04-13 12:07:25 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SRAdb on tokay2


To the developers/maintainers of the SRAdb package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SRAdb.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1873/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SRAdb 1.56.0  (landing page)
Jack Zhu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/SRAdb
git_branch: RELEASE_3_14
git_last_commit: 519051c
git_last_commit_date: 2021-10-26 11:55:53 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SRAdb
Version: 1.56.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SRAdb_1.56.0.tar.gz && rm -rf SRAdb.buildbin-libdir && mkdir SRAdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SRAdb.buildbin-libdir SRAdb_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SRAdb_1.56.0.zip && rm SRAdb_1.56.0.tar.gz SRAdb_1.56.0.zip
StartedAt: 2022-04-12 06:29:11 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:30:30 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SRAdb_1.56.0.tar.gz && rm -rf SRAdb.buildbin-libdir && mkdir SRAdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SRAdb.buildbin-libdir SRAdb_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SRAdb_1.56.0.zip && rm SRAdb_1.56.0.tar.gz SRAdb_1.56.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 66  555k   66  368k    0     0   896k      0 --:--:-- --:--:-- --:--:--  895k
100  555k  100  555k    0     0   690k      0 --:--:-- --:--:-- --:--:--  690k

install for i386

* installing *source* package 'SRAdb' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SRAdb'
    finding HTML links ... done
    IGVclear                                html  
    IGVcollapse                             html  
    IGVgenome                               html  
    IGVgoto                                 html  
    IGVload                                 html  
    IGVsession                              html  
    IGVsnapshot                             html  
    IGVsocket                               html  
    IGVsort                                 html  
    SRAdb-package                           html  
    ascpR                                   html  
    ascpSRA                                 html  
    colDescriptions                         html  
    entityGraph                             html  
    getFASTQfile                            html  
    getFASTQinfo                            html  
    getSRA                                  html  
    getSRAdbFile                            html  
    getSRAfile                              html  
    getSRAinfo                              html  
    listSRAfile                             html  
    sraConvert                              html  
    sraGraph                                html  
    startIGV                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SRAdb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SRAdb' as SRAdb_1.56.0.zip
* DONE (SRAdb)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SRAdb' successfully unpacked and MD5 sums checked