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This page was generated on 2022-04-13 12:07:22 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SIMD on tokay2


To the developers/maintainers of the SIMD package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SIMD.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1799/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SIMD 1.12.0  (landing page)
Jiadi Zhu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/SIMD
git_branch: RELEASE_3_14
git_last_commit: 3f95560
git_last_commit_date: 2021-10-26 12:46:50 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SIMD
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SIMD_1.12.0.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SIMD_1.12.0.zip && rm SIMD_1.12.0.tar.gz SIMD_1.12.0.zip
StartedAt: 2022-04-12 04:20:53 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:21:38 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 44.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SIMD_1.12.0.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SIMD_1.12.0.zip && rm SIMD_1.12.0.tar.gz SIMD_1.12.0.zip
###
##############################################################################
##############################################################################


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100 94241  100 94241    0     0   595k      0 --:--:-- --:--:-- --:--:--  601k

install for i386

* installing *source* package 'SIMD' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c pvalueclassify.c -o pvalueclassify.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/SIMD.buildbin-libdir/00LOCK-SIMD/00new/SIMD/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SIMD'
    finding HTML links ... done
    EM2_H1ESB1_MeDIP_sigleCpG               html  
    EM2_H1ESB2_MeDIP_sigleCpG               html  
    EM_H1ESB1_MeDIP_sigleCpG                html  
    EMalgorithm                             html  
    EMtest                                  html  
    H1ESB1_MRE_sigleCpG                     html  
    H1ESB2_MRE_sigleCpG                     html  
    SIMD-package                            html  
    all_CpGsite_bin_chr18                   html  
    classifypvalue                          html  
    emalgth                                 html  
    emalgth1                                html  
    probBinom                               html  
    three_mre_cpg                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SIMD' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c pvalueclassify.c -o pvalueclassify.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/SIMD.buildbin-libdir/SIMD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIMD' as SIMD_1.12.0.zip
* DONE (SIMD)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SIMD' successfully unpacked and MD5 sums checked