Job van Riet
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/ProteoDisco |
| git_branch: RELEASE_3_14 |
| git_last_commit: efdf16d |
| git_last_commit_date: 2021-10-26 13:12:13 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:07 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ProteoDisco package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ProteoDisco.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1475/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ProteoDisco 1.0.0 (landing page) Job van Riet
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ProteoDisco |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ProteoDisco_1.0.0.tar.gz && rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ProteoDisco_1.0.0.zip && rm ProteoDisco_1.0.0.tar.gz ProteoDisco_1.0.0.zip |
| StartedAt: 2022-04-12 07:33:38 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:35:20 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 102.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ProteoDisco_1.0.0.tar.gz && rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ProteoDisco_1.0.0.zip && rm ProteoDisco_1.0.0.tar.gz ProteoDisco_1.0.0.zip
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install for i386
* installing *source* package 'ProteoDisco' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'print' in package 'ProteoDisco'
Creating a new generic function for 'summary' in package 'ProteoDisco'
** help
*** installing help indices
converting help for package 'ProteoDisco'
finding HTML links ... done
ProteoDiscography html
ProteoDiscographyExample.hg19 html
checkProteotypicFragments html
dot-checkReferenceAnchor html
exportProteoDiscography html
generateJunctionModels html
generateProteoDiscography html
getDiscography html
importGenomicVariants.MAF html
importGenomicVariants html
importGenomicVariants.VCF html
importSpliceJunctions html
importTranscriptSequences html
incorporateGenomicVariants html
mutantTranscripts html
organism html
print html
seqinfo html
seqlevels html
setGenomicSequences html
setMutantTranscripts html
setTxDb html
show html
summary html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ProteoDisco' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ProteoDisco' as ProteoDisco_1.0.0.zip
* DONE (ProteoDisco)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ProteoDisco' successfully unpacked and MD5 sums checked