Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-01-19 13:06:51 -0500 (Wed, 19 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for MassArray on tokay2


To the developers/maintainers of the MassArray package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MassArray.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1052/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MassArray 1.46.0  (landing page)
Reid F. Thompson
Snapshot Date: 2022-01-18 01:55:07 -0500 (Tue, 18 Jan 2022)
git_url: https://git.bioconductor.org/packages/MassArray
git_branch: RELEASE_3_14
git_last_commit: d4621b4
git_last_commit_date: 2021-10-26 11:55:28 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MassArray
Version: 1.46.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MassArray_1.46.0.tar.gz && rm -rf MassArray.buildbin-libdir && mkdir MassArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MassArray.buildbin-libdir MassArray_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MassArray_1.46.0.zip && rm MassArray_1.46.0.tar.gz MassArray_1.46.0.zip
StartedAt: 2022-01-18 03:55:06 -0500 (Tue, 18 Jan 2022)
EndedAt: 2022-01-18 03:56:34 -0500 (Tue, 18 Jan 2022)
EllapsedTime: 88.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MassArray_1.46.0.tar.gz && rm -rf MassArray.buildbin-libdir && mkdir MassArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MassArray.buildbin-libdir MassArray_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MassArray_1.46.0.zip && rm MassArray_1.46.0.tar.gz MassArray_1.46.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 41  118k   41 51087    0     0   466k      0 --:--:-- --:--:-- --:--:--  466k
100  118k  100  118k    0     0   895k      0 --:--:-- --:--:-- --:--:--  893k

install for i386

* installing *source* package 'MassArray' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MassArray'
    finding HTML links ... done
    MassArray.example.data                  html  
    MassArrayData-class                     html  
    MassArrayFragment-class                 html  
    MassArrayPeak-class                     html  
    MassArraySpectrum-class                 html  
    ampliconPrediction                      html  
    analyzeCpGs                             html  
    bisConvert                              html  
    calcMW                                  html  
    calcMeth                                html  
    calcPercentAdduct                       html  
    calcPercentConversion                   html  
    combine-methods                         html  
    combine                                 html  
    convControl                             html  
    countCGs                                html  
    createWiggle                            html  
    estimatePrimerDimer                     html  
    evaluateSNPs                            html  
    expandSequence                          html  
    findCollisions                          html  
    findFragments                           html  
    findPeaks                               html  
    identifySNPs                            html  
    importEpiTyperData                      html  
    importEpiTyperData.new                  html  
    inSilicoFragmentation                   html  
    isAssayable                             html  
    numCollisions                           html  
    plot.MassArrayData                      html  
    position-methods                        html  
    position                                html  
    revComplement-methods                   html  
    revComplement                           html  
    rnaDigest                               html  
    samples-methods                         html  
    samples                                 html  
    sum.MassArraySpectrum                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MassArray' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MassArray' as MassArray_1.46.0.zip
* DONE (MassArray)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'MassArray' successfully unpacked and MD5 sums checked