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This page was generated on 2022-01-14 13:08:04 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for Maaslin2 on machv2


To the developers/maintainers of the Maaslin2 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Maaslin2.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1026/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Maaslin2 1.8.0  (landing page)
Lauren McIver
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/Maaslin2
git_branch: RELEASE_3_14
git_last_commit: 6e36871
git_last_commit_date: 2021-10-26 12:53:13 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: Maaslin2
Version: 1.8.0
Command: rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Maaslin2_1.8.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R Maaslin2.buildbin-libdir
StartedAt: 2022-01-13 20:29:51 -0500 (Thu, 13 Jan 2022)
EndedAt: 2022-01-13 20:30:07 -0500 (Thu, 13 Jan 2022)
EllapsedTime: 15.6 seconds
RetCode: 0
Status:   OK  
PackageFile: Maaslin2_1.8.0.tgz
PackageFileSize: 725 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Maaslin2_1.8.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R Maaslin2.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=Maaslin2.buildbin-libdir Maaslin2_1.8.0.tar.gz'
>>>>>>> 

* installing *source* package ‘Maaslin2’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.4
Current Matrix version is 1.4.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.7.21
Current TMB version is 1.7.22
Please re-install glmmTMB from source or restore original ‘TMB’ package (see '?reinstalling' for more information)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Maaslin2)