Multiple platform build/check report for BioC 3.14 - CHECK results for DelayedTensor on tokay2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4324
tokay2	Windows Server 2012 R2 Standard	x64	4.1.3 (2022-03-10) -- "One Push-Up"	4077
machv2	macOS 10.14.6 Mojave	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4137
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

Package: DelayedTensor

Version: 1.0.0

Command: C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:DelayedTensor.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings DelayedTensor_1.0.0.tar.gz

StartedAt: 2022-04-12 18:26:11 -0400 (Tue, 12 Apr 2022)

EndedAt: 2022-04-12 18:42:40 -0400 (Tue, 12 Apr 2022)

EllapsedTime: 989.7 seconds

RetCode: 0

Status: WARNINGS

CheckDir: DelayedTensor.Rcheck

Warnings: 1

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###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:DelayedTensor.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings DelayedTensor_1.0.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/DelayedTensor.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DelayedTensor/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DelayedTensor' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DelayedTensor' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                      old_size new_size compress
  human_mid_brain.rda    677Kb    441Kb       xz
  mouse_mid_brain.rda    761Kb    515Kb       xz
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
cp     166.37  23.26  247.30
tucker  23.85   2.30   33.30
mpca    11.84   1.83   16.82
pvd      6.92   1.03    9.39
hosvd    3.86   0.36    5.26
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
cp     180.36  24.72  248.83
tucker  28.68   4.03   39.60
mpca    13.40   1.82   18.29
pvd      7.73   1.09   10.33
hosvd    4.87   0.60    6.47
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 OK
** running tests for arch 'x64' ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING
See
  'C:/Users/biocbuild/bbs-3.14-bioc/meat/DelayedTensor.Rcheck/00check.log'
for details.

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DelayedTensor_1.0.0.tar.gz && rm -rf DelayedTensor.buildbin-libdir && mkdir DelayedTensor.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedTensor.buildbin-libdir DelayedTensor_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DelayedTensor_1.0.0.zip && rm DelayedTensor_1.0.0.tar.gz DelayedTensor_1.0.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 70 2247k   70 1589k    0     0  1636k      0  0:00:01 --:--:--  0:00:01 1635k
100 2247k  100 2247k    0     0  1781k      0  0:00:01  0:00:01 --:--:-- 1782k

install for i386

* installing *source* package 'DelayedTensor' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'kronecker' in package 'DelayedTensor'
Creating a new generic function for 'diag' in package 'DelayedTensor'
Creating a new generic function for 'diag<-' in package 'DelayedTensor'
** help
*** installing help indices
  converting help for package 'DelayedTensor'
    finding HTML links ... done
    DelayedDiagonalArray                    html  
    DelayedTensor-package                   html  
    cbind_list                              html  
    cp                                      html  
    cs_fold                                 html  
    cs_unfold                               html  
    diag                                    html  
    einsum                                  html  
    fnorm                                   html  
    fold                                    html  
    getSparse                               html  
    getVerbose                              html  
    hadamard                                html  
    hadamard_list                           html  
    hosvd                                   html  
    human_mid_brain                         html  
    innerProd                               html  
    k_fold                                  html  
    k_unfold                                html  
    khatri_rao                              html  
    khatri_rao_list                         html  
    kronecker                               html  
    kronecker_list                          html  
    list_rep                                html  
    matvec                                  html  
    modeMean                                html  
    modeSum                                 html  
    modebind_list                           html  
    mouse_mid_brain                         html  
    mpca                                    html  
    outerProd                               html  
    pvd                                     html  
    rbind_list                              html  
    rs_fold                                 html  
    rs_unfold                               html  
    setSparse                               html  
    setVerbose                              html  
    ttl                                     html  
    ttm                                     html  
    tucker                                  html  
    unfold                                  html  
    unmatvec                                html  
    vec                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DelayedTensor' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DelayedTensor' as DelayedTensor_1.0.0.zip
* DONE (DelayedTensor)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'DelayedTensor' successfully unpacked and MD5 sums checked


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library("DelayedArray")
Loading required package: stats4
Loading required package: Matrix
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:Matrix':

    expand, unname

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following object is masked from 'package:grDevices':

    windows


Attaching package: 'DelayedArray'

The following objects are masked from 'package:base':

    aperm, apply, rowsum, scale, sweep

> # library("HDF5Array") # comment out
> # library("BiocSingular") # comment out
> library("rTensor")

Attaching package: 'rTensor'

The following object is masked from 'package:S4Vectors':

    fold

> library("DelayedRandomArray")
> # library("irlba") # comment out
> # library("Matrix") # comment out
> library("einsum")
> library("DelayedTensor")

Attaching package: 'DelayedTensor'

The following object is masked from 'package:einsum':

    einsum

The following objects are masked from 'package:rTensor':

    cp, cs_fold, cs_unfold, fnorm, fold, hadamard_list, hosvd,
    innerProd, k_fold, k_unfold, khatri_rao, khatri_rao_list,
    kronecker_list, matvec, modeMean, modeSum, mpca, pvd, rs_fold,
    rs_unfold, ttl, ttm, tucker, unfold, unmatvec, vec

The following object is masked from 'package:S4Vectors':

    fold

The following objects are masked from 'package:Matrix':

    diag, diag<-, kronecker

The following object is masked from 'package:methods':

    kronecker

The following objects are masked from 'package:base':

    diag, diag<-, kronecker

> library("reticulate")
> library("testthat")
> library("HDF5Array")
Loading required package: rhdf5

Attaching package: 'HDF5Array'

The following object is masked from 'package:rhdf5':

    h5ls

> 
> # Setting
> options(testthat.use_colours = FALSE)
> options(delayedtensor.sparse = FALSE)
> options(delayedtensor.verbose = FALSE)
> setHDF5DumpCompressionLevel(level=9L)
> source("testthat/test_Einsum_objects.R")
> 
> # source("../R/Decomp.R") # comment out
> # source("../R/Einsum.R") # comment out
> # source("../R/Generics.R") # comment out
> # source("../R/Global-settings.R") # comment out
> # source("../R/Misc.R") # comment out
> # source("../R/SVD.R") # comment out
> # source("../R/Utils.R") # comment out
> # source("../R/zzz.R") # comment out
> 
> # for(size in c(1E+9,1E+8,1E+7,1E+6,1E+5,1E+4,1E+3,1E+2,50,20:1)){ # comment out
> # setAutoBlockSize(size=size) # comment out
> # getAutoBlockSize() # comment out
> test_file("testthat/test_Generics.R")

== Testing test_Generics.R =====================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 37 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 37 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 42 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 42 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 43 ] Done!
> test_file("testthat/test_Misc.R")

== Testing test_Misc.R =========================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ] Done!
> # test_file("testthat/test_SVD.R") # comment out
> test_file("testthat/test_4thorder.R")

== Testing test_4thorder.R =====================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ][1] "unfold"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ][1] "modeSum"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ][1] "innerProd"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ][1] "vec"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ][1] "fold"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ][1] "diag"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ][1] "diag"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ][1] "DelayedDiagonalArray"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ] Done!
> test_file("testthat/test_Einsum.R")

== Testing test_Einsum.R =======================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 43 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 45 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 46 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 50 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 51 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 52 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 53 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 59 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 60 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 61 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 62 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 63 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 64 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 65 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 66 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 67 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 68 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 69 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 70 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 71 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 72 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 73 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 74 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 75 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 76 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 77 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 78 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 79 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 80 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 81 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 82 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 83 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 84 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 84 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 85 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 87 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 88 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 89 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 90 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 91 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 92 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 95 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 97 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 98 ]
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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 100 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 101 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 102 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 103 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 104 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 105 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 106 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 107 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 108 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 109 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 110 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 111 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 112 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 113 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 114 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 115 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 116 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 117 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 118 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 119 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 120 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 121 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 122 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 123 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 124 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 125 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 126 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 127 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 128 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 129 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 130 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 131 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 132 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 133 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 134 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 135 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 136 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 137 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 138 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 139 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 140 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 141 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 142 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 143 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 144 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 145 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 146 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 147 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 148 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 149 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 150 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 151 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 152 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 153 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 154 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 155 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 156 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 157 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 158 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 159 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 160 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 160 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 161 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 162 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 163 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 164 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 165 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 166 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 167 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 168 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 169 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 170 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 171 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 172 ] Done!
> # gc();gc() # comment out
> # } # comment out
> 
> # setAutoBlockSize(size=1E+8)
> # test_file("testthat/test_Decomp.R")
> # test_file("testthat/test_Einsum_Py.R") # comment out
> # source("testthat/test_Verbose.R")
> # source("testthat/test_Sparse.R")
> 
> # Profiling
> # source("testthat/test_SuperBig.R") # comment out
> 
> proc.time()
   user  system elapsed 
  51.71    5.10   67.21


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library("DelayedArray")
Loading required package: stats4
Loading required package: Matrix
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:Matrix':

    expand, unname

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following object is masked from 'package:grDevices':

    windows


Attaching package: 'DelayedArray'

The following objects are masked from 'package:base':

    aperm, apply, rowsum, scale, sweep

> # library("HDF5Array") # comment out
> # library("BiocSingular") # comment out
> library("rTensor")

Attaching package: 'rTensor'

The following object is masked from 'package:S4Vectors':

    fold

> library("DelayedRandomArray")
> # library("irlba") # comment out
> # library("Matrix") # comment out
> library("einsum")
> library("DelayedTensor")

Attaching package: 'DelayedTensor'

The following object is masked from 'package:einsum':

    einsum

The following objects are masked from 'package:rTensor':

    cp, cs_fold, cs_unfold, fnorm, fold, hadamard_list, hosvd,
    innerProd, k_fold, k_unfold, khatri_rao, khatri_rao_list,
    kronecker_list, matvec, modeMean, modeSum, mpca, pvd, rs_fold,
    rs_unfold, ttl, ttm, tucker, unfold, unmatvec, vec

The following object is masked from 'package:S4Vectors':

    fold

The following objects are masked from 'package:Matrix':

    diag, diag<-, kronecker

The following object is masked from 'package:methods':

    kronecker

The following objects are masked from 'package:base':

    diag, diag<-, kronecker

> library("reticulate")
> library("testthat")
> library("HDF5Array")
Loading required package: rhdf5

Attaching package: 'HDF5Array'

The following object is masked from 'package:rhdf5':

    h5ls

> 
> # Setting
> options(testthat.use_colours = FALSE)
> options(delayedtensor.sparse = FALSE)
> options(delayedtensor.verbose = FALSE)
> setHDF5DumpCompressionLevel(level=9L)
> source("testthat/test_Einsum_objects.R")
> 
> # source("../R/Decomp.R") # comment out
> # source("../R/Einsum.R") # comment out
> # source("../R/Generics.R") # comment out
> # source("../R/Global-settings.R") # comment out
> # source("../R/Misc.R") # comment out
> # source("../R/SVD.R") # comment out
> # source("../R/Utils.R") # comment out
> # source("../R/zzz.R") # comment out
> 
> # for(size in c(1E+9,1E+8,1E+7,1E+6,1E+5,1E+4,1E+3,1E+2,50,20:1)){ # comment out
> # setAutoBlockSize(size=size) # comment out
> # getAutoBlockSize() # comment out
> test_file("testthat/test_Generics.R")

== Testing test_Generics.R =====================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 37 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 37 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 42 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 42 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 43 ] Done!
> test_file("testthat/test_Misc.R")

== Testing test_Misc.R =========================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ] Done!
> # test_file("testthat/test_SVD.R") # comment out
> test_file("testthat/test_4thorder.R")

== Testing test_4thorder.R =====================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ][1] "unfold"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ][1] "modeSum"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ][1] "innerProd"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ][1] "vec"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ][1] "fold"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ][1] "diag"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ][1] "diag"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ][1] "DelayedDiagonalArray"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ] Done!
> test_file("testthat/test_Einsum.R")

== Testing test_Einsum.R =======================================================

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 36 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 37 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 38 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 41 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 42 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 43 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 44 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 45 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 46 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 47 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 48 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 49 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 50 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 51 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 52 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 53 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 54 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 55 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 56 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 57 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 58 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 59 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 60 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 61 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 62 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 63 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 64 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 65 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 66 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 67 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 68 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 69 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 70 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 71 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 72 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 73 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 74 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 75 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 76 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 77 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 78 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 79 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 80 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 81 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 81 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 82 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 83 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 84 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 84 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 85 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 86 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 87 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 88 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 89 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 90 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 91 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 92 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 93 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 94 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 95 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 96 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 97 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 98 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 99 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 100 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 101 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 102 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 103 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 104 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 105 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 106 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 107 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 108 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 109 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 110 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 111 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 112 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 113 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 114 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 115 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 116 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 117 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 118 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 119 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 120 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 121 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 122 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 123 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 124 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 125 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 126 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 127 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 128 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 129 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 130 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 131 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 132 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 133 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 134 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 135 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 136 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 137 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 138 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 139 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 140 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 141 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 142 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 143 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 144 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 145 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 146 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 147 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 148 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 149 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 150 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 151 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 152 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 153 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 154 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 155 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 156 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 157 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 158 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 159 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 160 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 160 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 161 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 162 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 163 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 164 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 165 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 166 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 167 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 168 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 169 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 170 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 171 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 172 ] Done!
> # gc();gc() # comment out
> # } # comment out
> 
> # setAutoBlockSize(size=1E+8)
> # test_file("testthat/test_Decomp.R")
> # test_file("testthat/test_Einsum_Py.R") # comment out
> # source("testthat/test_Verbose.R")
> # source("testthat/test_Sparse.R")
> 
> # Profiling
> # source("testthat/test_SuperBig.R") # comment out
> 
> proc.time()
   user  system elapsed 
  56.50    5.70   72.65

name	user	system	elapsed
DelayedDiagonalArray	0.04	0.03	0.08
DelayedTensor-package	0	0	0
cbind_list	0.55	0.08	0.69
cp	166.37	23.26	247.30
cs_fold	0.45	0.16	0.79
cs_unfold	0.39	0.04	0.48
diag	0.48	0.05	0.58
einsum	1.02	0.19	1.36
fnorm	0.11	0.01	0.12
fold	0.59	0.07	0.86
getSparse	0	0	0
getVerbose	0	0	0
hadamard	0.28	0.04	0.37
hadamard_list	0.31	0.05	0.36
hosvd	3.86	0.36	5.26
human_mid_brain	0.00	0.02	0.02
innerProd	0.11	0.00	0.11
k_fold	0.31	0.06	0.53
k_unfold	0.22	0.04	0.30
khatri_rao	0.17	0.04	0.22
khatri_rao_list	0.20	0.01	0.25
kronecker	0.10	0.00	0.09
kronecker_list	0.20	0.00	0.24
list_rep	0.16	0.00	0.15
matvec	0.18	0.05	0.26
modeMean	1.40	0.12	1.88
modeSum	1.44	0.20	1.90
modebind_list	1.32	0.14	1.77
mouse_mid_brain	0	0	0
mpca	11.84	1.83	16.82
outerProd	0.33	0.03	0.38
pvd	6.92	1.03	9.39
rbind_list	0.55	0.06	0.70
rs_fold	0.61	0.11	0.81
rs_unfold	0.34	0.05	0.44
setSparse	0	0	0
setVerbose	0	0	0
ttl	1.22	0.09	1.62
ttm	0.79	0.05	1.00
tucker	23.85	2.30	33.30
unfold	0.30	0.04	0.41
unmatvec	0.53	0.06	0.75
vec	0.22	0.04	0.28

name	user	system	elapsed
DelayedDiagonalArray	0.06	0.00	0.06
DelayedTensor-package	0	0	0
cbind_list	0.61	0.05	0.77
cp	180.36	24.72	248.83
cs_fold	0.63	0.02	0.74
cs_unfold	0.34	0.04	0.50
diag	0.61	0.05	0.68
einsum	1.61	0.12	1.97
fnorm	0.10	0.04	0.14
fold	0.63	0.09	0.83
getSparse	0	0	0
getVerbose	0	0	0
hadamard	0.30	0.08	0.40
hadamard_list	0.37	0.04	0.46
hosvd	4.87	0.60	6.47
human_mid_brain	0	0	0
innerProd	0.19	0.00	0.18
k_fold	0.75	0.04	0.94
k_unfold	0.33	0.07	0.42
khatri_rao	0.26	0.03	0.33
khatri_rao_list	0.32	0.05	0.39
kronecker	0.16	0.01	0.17
kronecker_list	0.28	0.02	0.31
list_rep	0.22	0.01	0.24
matvec	0.30	0.03	0.39
modeMean	1.97	0.36	2.73
modeSum	1.58	0.20	2.08
modebind_list	1.78	0.13	2.19
mouse_mid_brain	0	0	0
mpca	13.40	1.82	18.29
outerProd	0.44	0.04	0.50
pvd	7.73	1.09	10.33
rbind_list	0.45	0.05	0.59
rs_fold	0.55	0.06	0.75
rs_unfold	0.39	0.01	0.45
setSparse	0	0	0
setVerbose	0	0	0
ttl	0.98	0.18	1.45
ttm	0.86	0.14	1.16
tucker	28.68	4.03	39.60
unfold	0.41	0.05	0.52
unmatvec	0.73	0.04	0.92
vec	0.28	0.03	0.33

CHECK results for DelayedTensor on tokay2

Summary

Command output

Installation output

Tests output

Example timings