Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-26 13:06:25 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for CRImage on tokay2


To the developers/maintainers of the CRImage package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CRImage.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 415/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CRImage 1.42.0  (landing page)
Henrik Failmezger , Yinyin Yuan
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/CRImage
git_branch: RELEASE_3_14
git_last_commit: 7a30984
git_last_commit_date: 2021-10-26 11:57:17 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CRImage
Version: 1.42.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRImage_1.42.0.tar.gz && rm -rf CRImage.buildbin-libdir && mkdir CRImage.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRImage.buildbin-libdir CRImage_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRImage_1.42.0.zip && rm CRImage_1.42.0.tar.gz CRImage_1.42.0.zip
StartedAt: 2022-01-25 04:34:37 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 04:35:59 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 82.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRImage_1.42.0.tar.gz && rm -rf CRImage.buildbin-libdir && mkdir CRImage.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRImage.buildbin-libdir CRImage_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRImage_1.42.0.zip && rm CRImage_1.42.0.tar.gz CRImage_1.42.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 14 6453k   14  923k    0     0  2277k      0  0:00:02 --:--:--  0:00:02 2275k
 94 6453k   94 6119k    0     0  4411k      0  0:00:01  0:00:01 --:--:-- 4412k
100 6453k  100 6453k    0     0  4506k      0  0:00:01  0:00:01 --:--:-- 4506k

install for i386

* installing *source* package 'CRImage' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CRImage'
    finding HTML links ... done
    CRImage-internal                        html  
    CRImage-package                         html  
    SauvolaThreshold                        html  
    calculateCellularity                    html  
    calculateMeanStdTarget                  html  
    calculateOtsu                           html  
    classifyCells                           html  
    colorCorrection                         html  
    convertHSVToRGB                         html  
    convertLABToRGB                         html  
    convertRGBToHSV                         html  
    convertRGBToLAB                         html  
    correctCopyNumber                       html  
    createBinaryImage                       html  
    createClassifier                        html  
    labelCells                              html  
    plotCorrectedCN                         html  
    processAperio                           html  
    segmentImage                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CRImage' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CRImage' as CRImage_1.42.0.zip
* DONE (CRImage)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CRImage' successfully unpacked and MD5 sums checked