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This page was generated on 2022-04-13 12:05:12 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for CNAnorm on nebbiolo2


To the developers/maintainers of the CNAnorm package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNAnorm.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 349/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNAnorm 1.40.0  (landing page)
Stefano Berri
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/CNAnorm
git_branch: RELEASE_3_14
git_last_commit: fe146be
git_last_commit_date: 2021-10-26 12:00:37 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CNAnorm
Version: 1.40.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL CNAnorm
StartedAt: 2022-04-12 03:11:57 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 03:12:04 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 7.9 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL CNAnorm
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘CNAnorm’ ...
** using staged installation
** libs
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c daxpy.f -o daxpy.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c ddot.f -o ddot.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c dgbfa.f -o dgbfa.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c dgbsl.f -o dgbsl.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c dscal.f -o dscal.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c dsmooth.f -o dsmooth.o
f951: Warning: Nonconforming tab character in column 1 of line 14 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 15 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 16 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 17 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 18 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 19 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 21 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 22 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 23 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 24 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 25 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 26 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 27 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 28 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 29 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 31 [-Wtabs]
f951: Warning: Nonconforming tab character in column 2 of line 32 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 33 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 34 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 35 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 36 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 37 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 38 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 39 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 40 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 41 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 42 [-Wtabs]
f951: Warning: Nonconforming tab character in column 4 of line 43 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 57 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 60 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 63 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 64 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 65 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 66 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 67 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 68 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 69 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 71 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 72 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 73 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 74 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 75 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 76 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 77 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 78 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 79 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 80 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 81 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 82 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 83 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 84 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 85 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 87 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 88 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 89 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 90 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 91 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 92 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 93 [-Wtabs]
f951: Warning: Nonconforming tab character in column 3 of line 94 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 95 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 96 [-Wtabs]
dsmooth.f:62:20:

   62 |  do 10 i=1,n-1
      |                    1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:70:7:

   70 |      &       diff(i-1)*diff(i+1) .lt. 0.) isplit(i)=1
      |       1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:50:0:

   50 |  function amed3(a,b,c)
      | 
Warning: ‘__result_amed3’ may be used uninitialized in this function [-Wmaybe-uninitialized]
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c idamax.f -o idamax.o
gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o CNAnorm.so daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-CNAnorm/00new/CNAnorm/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNAnorm)