Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-21 13:06:06 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for CHRONOS on tokay2


To the developers/maintainers of the CHRONOS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CHRONOS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 317/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CHRONOS 1.22.0  (landing page)
Panos Balomenos
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/CHRONOS
git_branch: RELEASE_3_14
git_last_commit: 94f869e
git_last_commit_date: 2021-10-26 12:27:42 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CHRONOS
Version: 1.22.0
Command: rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.22.0.tar.gz
StartedAt: 2022-01-21 05:47:16 -0500 (Fri, 21 Jan 2022)
EndedAt: 2022-01-21 05:47:49 -0500 (Fri, 21 Jan 2022)
EllapsedTime: 33.5 seconds
RetCode: 0
Status:   OK  
PackageFile: CHRONOS_1.22.0.zip
PackageFileSize: 1.327 MiB

Command output

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###
### Running command:
###
###   rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.22.0.tar.gz
###
##############################################################################
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* installing *source* package 'CHRONOS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CHRONOS'
    finding HTML links ... done
    CHRONOSrun                              html  
    convertMiRNANomenclature                html  
    convertNomenclature                     html  
    createPathwayGraphs                     html  
    downloadKEGGPathwayList                 html  
    downloadMiRecords                       html  
    downloadPathways                        html  
    extractLinearSubpathways                html  
    extractNonLinearSubpathways             html  
    getEdgeTypes                            html  
    importExpressions                       html  
    pathwayMeasures                         html  
    scoreSubpathways                        html  
    subpathwayKEGGmap                       html  
    subpathwayMiRNAs                        html  
    visualizeResults                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'CHRONOS' as CHRONOS_1.22.0.zip
* DONE (CHRONOS)