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This page was generated on 2022-01-14 13:06:01 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for AWFisher on tokay2


To the developers/maintainers of the AWFisher package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AWFisher.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 101/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AWFisher 1.8.0  (landing page)
Zhiguang Huo
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/AWFisher
git_branch: RELEASE_3_14
git_last_commit: fda6e38
git_last_commit_date: 2021-10-26 12:52:57 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: AWFisher
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AWFisher_1.8.0.tar.gz && rm -rf AWFisher.buildbin-libdir && mkdir AWFisher.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AWFisher.buildbin-libdir AWFisher_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AWFisher_1.8.0.zip && rm AWFisher_1.8.0.tar.gz AWFisher_1.8.0.zip
StartedAt: 2022-01-13 04:12:54 -0500 (Thu, 13 Jan 2022)
EndedAt: 2022-01-13 04:13:56 -0500 (Thu, 13 Jan 2022)
EllapsedTime: 62.6 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AWFisher_1.8.0.tar.gz && rm -rf AWFisher.buildbin-libdir && mkdir AWFisher.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AWFisher.buildbin-libdir AWFisher_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AWFisher_1.8.0.zip && rm AWFisher_1.8.0.tar.gz AWFisher_1.8.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 1797k  100 1797k    0     0  4032k      0 --:--:-- --:--:-- --:--:-- 4031k

install for i386

* installing *source* package 'AWFisher' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c AWFisher.cpp -o AWFisher.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o AWFisher.dll tmp.def AWFisher.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/AWFisher.buildbin-libdir/00LOCK-AWFisher/00new/AWFisher/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'AWFisher'
    finding HTML links ... done
    AWFisher_pvalue                         html  
    biomarkerCategorization                 html  
    data_mouseMetabolism                    html  
    function_edgeR                          html  
    function_limma                          html  
    variabilityIndex                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'AWFisher' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c AWFisher.cpp -o AWFisher.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o AWFisher.dll tmp.def AWFisher.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/AWFisher.buildbin-libdir/AWFisher/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AWFisher' as AWFisher_1.8.0.zip
* DONE (AWFisher)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'AWFisher' successfully unpacked and MD5 sums checked