Luke Zappia
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/splatter |
| git_branch: RELEASE_3_13 |
| git_last_commit: 62da653 |
| git_last_commit_date: 2021-05-20 04:36:12 -0400 (Thu, 20 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:24 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the splatter package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/splatter.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1828/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| splatter 1.16.1 (landing page) Luke Zappia
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: splatter |
| Version: 1.16.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/splatter_1.16.1.tar.gz && rm -rf splatter.buildbin-libdir && mkdir splatter.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=splatter.buildbin-libdir splatter_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL splatter_1.16.1.zip && rm splatter_1.16.1.tar.gz splatter_1.16.1.zip |
| StartedAt: 2021-10-14 09:18:15 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:19:49 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 94.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/splatter_1.16.1.tar.gz && rm -rf splatter.buildbin-libdir && mkdir splatter.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=splatter.buildbin-libdir splatter_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL splatter_1.16.1.zip && rm splatter_1.16.1.tar.gz splatter_1.16.1.zip
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install for i386
* installing *source* package 'splatter' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'splatter'
finding HTML links ... done
BASiCSEstimate html
BASiCSParams html
BASiCSSimulate html
KersplatParams html
Lun2Params html
LunParams html
MFAParams html
Params html
PhenoParams html
SCDDParams html
SimpleParams html
SparseDCParams html
SplatParams html
SplatPopParams html
ZINBParams html
addFeatureStats html
finding level-2 HTML links ... done
addGeneLengths html
bridge html
bringItemsForward html
checkDependencies html
co.var html
compareSCEs html
diffSCEs html
expandParams html
getBetaStepProbs html
getCounts html
getLNormFactors html
getParam html
getParams html
getPathOrder html
kersplatEstBCV html
kersplatEstLib html
kersplatEstMean html
kersplatEstimate html
kersplatGenNetwork html
kersplatSample html
kersplatSelectRegs html
kersplatSetup html
kersplatSimAmbientCounts html
kersplatSimCellCounts html
kersplatSimCellMeans html
kersplatSimCounts html
kersplatSimGeneMeans html
kersplatSimLibSizes html
kersplatSimPaths html
kersplatSimulate html
listSims html
logistic html
lun2Estimate html
lun2Simulate html
lunEstimate html
lunSimulate html
makeCompPanel html
makeDiffPanel html
makeOverallPanel html
mfaEstimate html
mfaSimulate html
minimiseSCE html
mockBulkMatrix html
mockBulkeQTL html
mockGFF html
mockVCF html
newParams html
phenoEstimate html
phenoSimulate html
rbindMatched html
sampleDensity html
scDDEstimate html
scDDSimulate html
selectFit html
setParam html
setParamUnchecked html
setParams html
setParamsUnchecked html
showDFs html
showPP html
showValues html
simpleEstimate html
simpleSimulate html
sparseDCEstimate html
sparseDCSimulate html
sparsifyMatrices html
splatEstBCV html
splatEstDropout html
splatEstLib html
splatEstMean html
splatEstOutlier html
splatEstimate html
splatPopAssignMeans html
splatPopCleanSCE html
splatPopConditionEffects html
splatPopConditionalEffects html
splatPopDesignBatches html
splatPopDesignConditions html
splatPopEstimate html
splatPopEstimateEffectSize html
splatPopEstimateMeanCV html
splatPopGroupEffects html
splatPopParseGenes html
splatPopParseVCF html
splatPopQuantNorm html
splatPopQuantNormKey html
splatPopSimBatchEffects html
splatPopSimConditionalEffects html
splatPopSimEffects html
splatPopSimGeneMeans html
splatPopSimMeans html
splatPopSimulate html
splatPopSimulateMeans html
splatPopSimulateSC html
splatPopSimulateSample html
splatPopeQTLEffects html
splatSimBCVMeans html
splatSimBatchCellMeans html
splatSimBatchEffects html
splatSimCellMeans html
splatSimDE html
splatSimDropout html
splatSimGeneMeans html
splatSimLibSizes html
splatSimTrueCounts html
splatSimulate html
splatter html
summariseDiff html
summariseKS html
summariseStats html
tidyStatSumm html
winsorize html
zinbEstimate html
zinbSimulate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'splatter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'splatter' as splatter_1.16.1.zip
* DONE (splatter)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'splatter' successfully unpacked and MD5 sums checked