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###
### Running command:
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###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/selectKSigs_1.4.0.tar.gz && rm -rf selectKSigs.buildbin-libdir && mkdir selectKSigs.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=selectKSigs.buildbin-libdir selectKSigs_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL selectKSigs_1.4.0.zip && rm selectKSigs_1.4.0.tar.gz selectKSigs_1.4.0.zip
###
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100 17785  100 17785    0     0   148k      0 --:--:-- --:--:-- --:--:--  149k

install for i386

* installing *source* package 'selectKSigs' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c EMalgorithm.cpp -o EMalgorithm.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c convertFromToVector.cpp -o convertFromToVector.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o selectKSigs.dll tmp.def EMalgorithm.o RcppExports.o convertFromToVector.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/selectKSigs.buildbin-libdir/00LOCK-selectKSigs/00new/selectKSigs/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'selectKSigs'
    finding HTML links ... done
    Calculate_Likelihood_test               html  
    calcPMSLikelihood                       html  
    convertFromTurbo_F                      html  
    convertFromTurbo_Q                      html  
    convertToTurbo_F                        html  
    convertToTurbo_Q                        html  
    cv_PMSignature                          html  
    getBG                                   html  
    getCounts                               html  
    getExposures                            html  
    getFeatureVec                           html  
    getFeatures                             html  
    getK                                    html  
    getLL                                   html  
    getLogLikelihoodC                       html  
    getSamplelist                           html  
    getSamplelistG                          html  
    getSignatures                           html  
    getTranscription                        html  
    select_kth_fold                         html  
    splitG                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'selectKSigs' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c EMalgorithm.cpp -o EMalgorithm.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c convertFromToVector.cpp -o convertFromToVector.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o selectKSigs.dll tmp.def EMalgorithm.o RcppExports.o convertFromToVector.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/selectKSigs.buildbin-libdir/selectKSigs/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'selectKSigs' as selectKSigs_1.4.0.zip
* DONE (selectKSigs)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'selectKSigs' successfully unpacked and MD5 sums checked