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This page was generated on 2021-10-15 15:06:10 -0400 (Fri, 15 Oct 2021).

INSTALL results for marr on tokay2

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raw results

Package 1032/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
marr 1.2.0  (landing page)
Tusharkanti Ghosh
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/marr
git_branch: RELEASE_3_13
git_last_commit: f158650
git_last_commit_date: 2021-05-19 12:57:46 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: marr
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/marr_1.2.0.tar.gz && rm -rf marr.buildbin-libdir && mkdir marr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=marr.buildbin-libdir marr_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL marr_1.2.0.zip && rm marr_1.2.0.tar.gz marr_1.2.0.zip
StartedAt: 2021-10-14 09:00:45 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 09:04:27 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 222.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/marr_1.2.0.tar.gz && rm -rf marr.buildbin-libdir && mkdir marr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=marr.buildbin-libdir marr_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL marr_1.2.0.zip && rm marr_1.2.0.tar.gz marr_1.2.0.zip
###
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install for i386

* installing *source* package 'marr' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c marrUtility.cpp -o marrUtility.o
marrUtility.cpp: In function 'Rcpp::NumericVector getSS(Rcpp::NumericVector)':
marrUtility.cpp:75:7: warning: variable 'i' set but not used [-Wunused-but-set-variable]
   int i=0;
       ^
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o marr.dll tmp.def RcppExports.o marrUtility.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/marr.buildbin-libdir/00LOCK-marr/00new/marr/libs/i386
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'marr'
    finding HTML links ... done
    Marr-class                              html  
    Marr                                    html  
    MarrAlpha                               html  
    MarrData                                html  
    MarrFeatureVars                         html  
    MarrFeatures                            html  
    MarrFeaturesfiltered                    html  
    MarrFilterData                          html  
    MarrPFeatures                           html  
    MarrPSamplepairs                        html  
    MarrPlotFeatures                        html  
    MarrPlotSamplepairs                     html  
    MarrProc                                html  
    MarrSamplepairs                         html  
    MarrSamplepairsfiltered                 html  
    data.frameORSummarizedExperiment-class
                                            html  
    msprepCOPD                              html  
    vectorORNull-class                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'marr' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c marrUtility.cpp -o marrUtility.o
marrUtility.cpp: In function 'Rcpp::NumericVector getSS(Rcpp::NumericVector)':
marrUtility.cpp:75:7: warning: variable 'i' set but not used [-Wunused-but-set-variable]
   int i=0;
       ^
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o marr.dll tmp.def RcppExports.o marrUtility.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/marr.buildbin-libdir/marr/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'marr' as marr_1.2.0.zip
* DONE (marr)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'marr' successfully unpacked and MD5 sums checked