Johannes Ptok
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/VarCon |
| git_branch: RELEASE_3_13 |
| git_last_commit: aeff27c |
| git_last_commit_date: 2021-05-19 12:58:06 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:26 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the VarCon package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VarCon.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1993/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| VarCon 1.0.0 (landing page) Johannes Ptok
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: VarCon |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/VarCon_1.0.0.tar.gz && rm -rf VarCon.buildbin-libdir && mkdir VarCon.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VarCon.buildbin-libdir VarCon_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL VarCon_1.0.0.zip && rm VarCon_1.0.0.tar.gz VarCon_1.0.0.zip |
| StartedAt: 2021-10-14 10:14:27 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:15:36 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 69.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/VarCon_1.0.0.tar.gz && rm -rf VarCon.buildbin-libdir && mkdir VarCon.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VarCon.buildbin-libdir VarCon_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL VarCon_1.0.0.zip && rm VarCon_1.0.0.tar.gz VarCon_1.0.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 1747k 0 2487 0 0 30427 0 0:00:58 --:--:-- 0:00:58 30329
93 1747k 93 1637k 0 0 1575k 0 0:00:01 0:00:01 --:--:-- 1575k
100 1747k 100 1747k 0 0 1621k 0 0:00:01 0:00:01 --:--:-- 1622k
install for i386
* installing *source* package 'VarCon' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'VarCon'
finding HTML links ... done
calculateHZEIperNT html
calculateMaxEntScanScore html
gene2transcript html
generateHEXplorerPlot html
getMaxEntInfo html
getSeqInfoFromVariation html
hbg html
hex html
prepareReferenceFasta html
referenceDnaStringSet html
startVarConApp html
transCoord html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'VarCon' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'VarCon' as VarCon_1.0.0.zip
* DONE (VarCon)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'VarCon' successfully unpacked and MD5 sums checked