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This page was generated on 2021-10-15 15:06:21 -0400 (Fri, 15 Oct 2021).

CHECK results for SAGx on tokay2

To the developers/maintainers of the SAGx package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SAGx.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1663/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SAGx 1.66.0  (landing page)
Per Broberg,
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/SAGx
git_branch: RELEASE_3_13
git_last_commit: 30e2ee2
git_last_commit_date: 2021-05-19 11:38:10 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: SAGx
Version: 1.66.0
Command: C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:SAGx.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings SAGx_1.66.0.tar.gz
StartedAt: 2021-10-15 05:01:04 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 05:01:09 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 4.6 seconds
RetCode: 1
Status:   ERROR  
CheckDir: SAGx.Rcheck
Warnings: NA

Command output

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###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:SAGx.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings SAGx_1.66.0.tar.gz
###
##############################################################################
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* using log directory 'C:/Users/biocbuild/bbs-3.13-bioc/meat/SAGx.Rcheck'
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'SAGx/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'SAGx' version '1.66.0'
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: 'KEGG.db'

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
* DONE

Status: 1 ERROR
See
  'C:/Users/biocbuild/bbs-3.13-bioc/meat/SAGx.Rcheck/00check.log'
for details.


Installation output


Tests output


Example timings