Luca De Sano
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/OncoScore |
| git_branch: RELEASE_3_13 |
| git_last_commit: f0fc479 |
| git_last_commit_date: 2021-05-19 12:19:03 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:14 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the OncoScore package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OncoScore.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1307/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| OncoScore 1.20.0 (landing page) Luca De Sano
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: OncoScore |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/OncoScore_1.20.0.tar.gz && rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OncoScore.buildbin-libdir OncoScore_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL OncoScore_1.20.0.zip && rm OncoScore_1.20.0.tar.gz OncoScore_1.20.0.zip |
| StartedAt: 2021-10-14 08:11:11 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:14:44 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 212.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/OncoScore_1.20.0.tar.gz && rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OncoScore.buildbin-libdir OncoScore_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL OncoScore_1.20.0.zip && rm OncoScore_1.20.0.tar.gz OncoScore_1.20.0.zip
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install for i386
* installing *source* package 'OncoScore' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'OncoScore'
finding HTML links ... done
combine.query.results html
combine.single.matrix html
compute.frequencies.scores html
compute.oncoscore html
compute.oncoscore.from.region html
compute.oncoscore.timeseries html
estimate.oncogenes html
genes html
get.genes.from.biomart html
get.list.from.xml html
get.pubmed.driver.analysis html
perform.query html
perform.query.from.region html
perform.query.timeseries html
plot.oncoscore html
plot.oncoscore.timeseries html
query html
query.timepoints html
timepoints html
try.scan html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'OncoScore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OncoScore' as OncoScore_1.20.0.zip
* DONE (OncoScore)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'OncoScore' successfully unpacked and MD5 sums checked