Back to Multiple platform build/check report for BioC 3.13
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:05:43 -0400 (Fri, 15 Oct 2021).

INSTALL results for InterMineR on nebbiolo1

To the developers/maintainers of the InterMineR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/InterMineR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 935/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
InterMineR 1.14.1  (landing page)
InterMine Team
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/InterMineR
git_branch: RELEASE_3_13
git_last_commit: 1a090a5
git_last_commit_date: 2021-05-27 05:34:42 -0400 (Thu, 27 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: InterMineR
Version: 1.14.1
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL InterMineR
StartedAt: 2021-10-14 06:14:09 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 06:14:30 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 21.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL InterMineR
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘InterMineR’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘intersect’ in package ‘InterMineR’
Creating a new generic function for ‘union’ in package ‘InterMineR’
** help
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:41: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:42: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:50: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:51: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:59: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:60: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:63: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:66: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:69: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:72: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:80: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:81: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:84: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:87: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:90: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:98: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:99: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:102: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:105: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:108: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:116: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:117: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:120: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:123: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:126: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:134: unexpected section header '\arguments'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:135: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:138: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:141: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:144: unknown macro '\item'
Warning: /home/biocbuild/bbs-3.13-bioc/meat/InterMineR/man/ListManager-methods.Rd:147: unknown macro '\item'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package keeps a record of temporary installation path
* DONE (InterMineR)