Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the GIGSEA package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GIGSEA.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 769/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
GIGSEA 1.10.0 (landing page) Shijia Zhu
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: GIGSEA |
Version: 1.10.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GIGSEA_1.10.0.tar.gz && rm -rf GIGSEA.buildbin-libdir && mkdir GIGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GIGSEA.buildbin-libdir GIGSEA_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GIGSEA_1.10.0.zip && rm GIGSEA_1.10.0.tar.gz GIGSEA_1.10.0.zip |
StartedAt: 2021-10-14 07:05:37 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 07:06:27 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 49.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GIGSEA_1.10.0.tar.gz && rm -rf GIGSEA.buildbin-libdir && mkdir GIGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GIGSEA.buildbin-libdir GIGSEA_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GIGSEA_1.10.0.zip && rm GIGSEA_1.10.0.tar.gz GIGSEA_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 29 1091k 29 326k 0 0 1010k 0 0:00:01 --:--:-- 0:00:01 1011k 100 1091k 100 1091k 0 0 2732k 0 --:--:-- --:--:-- --:--:-- 2735k install for i386 * installing *source* package 'GIGSEA' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GIGSEA' finding HTML links ... done MSigDB.KEGG.Pathway html MSigDB.TF html MSigDB.miRNA html TargetScan.miRNA html dataFrame2geneSet html geneSet2Net html geneSet2sparseMatrix html gmt2geneSet html heart.metaXcan html matrixPval html orderedIntersect html permutationMultipleLm html permutationMultipleLmMatrix html permutationSimpleLm html permutationSimpleLmMatrix html runGIGSEA html weightedGSEA html weightedMultipleLm html weightedPearsonCorr html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GIGSEA' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GIGSEA' as GIGSEA_1.10.0.zip * DONE (GIGSEA) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'GIGSEA' successfully unpacked and MD5 sums checked