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This page was generated on 2021-10-15 15:05:40 -0400 (Fri, 15 Oct 2021).

BUILD results for ENVISIONQuery on nebbiolo1

To the developers/maintainers of the ENVISIONQuery package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ENVISIONQuery.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 578/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ENVISIONQuery 1.40.0  (landing page)
Alex Lisovich , Roger Day
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/ENVISIONQuery
git_branch: RELEASE_3_13
git_last_commit: 1cb737f
git_last_commit_date: 2021-05-19 11:47:55 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: ENVISIONQuery
Version: 1.40.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ENVISIONQuery
StartedAt: 2021-10-14 07:12:11 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 07:12:15 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 4.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ENVISIONQuery
###
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* checking for file ‘ENVISIONQuery/DESCRIPTION’ ... OK
* preparing ‘ENVISIONQuery’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ENVISIONQuery.Rnw’ using Sweave
Loading required package: rJava
Loading required package: XML
Warning in getService("ID Conversion") :
  ENVISIONQuery: Invalid service name
Warning in getService("Reactome") : ENVISIONQuery: Invalid service name

Error: processing vignette 'ENVISIONQuery.Rnw' failed with diagnostics:
 chunk 1 (label = chunk1) 
Error in if (!(toolName %in% toolNames)) { : argument is of length zero

--- failed re-building ‘ENVISIONQuery.Rnw’

SUMMARY: processing the following file failed:
  ‘ENVISIONQuery.Rnw’

Error: Vignette re-building failed.
Execution halted