Sara Ballouz
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/EGAD |
| git_branch: RELEASE_3_13 |
| git_last_commit: 948910f |
| git_last_commit_date: 2021-05-19 12:20:29 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the EGAD package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EGAD.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 559/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| EGAD 1.20.0 (landing page) Sara Ballouz
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: EGAD |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EGAD_1.20.0.tar.gz && rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EGAD_1.20.0.zip && rm EGAD_1.20.0.tar.gz EGAD_1.20.0.zip |
| StartedAt: 2021-10-14 09:58:35 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:02:24 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 229.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EGAD_1.20.0.tar.gz && rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EGAD_1.20.0.zip && rm EGAD_1.20.0.tar.gz EGAD_1.20.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0
8 14.5M 8 1269k 0 0 668k 0 0:00:22 0:00:01 0:00:21 668k
20 14.5M 20 3011k 0 0 1031k 0 0:00:14 0:00:02 0:00:12 1031k
35 14.5M 35 5243k 0 0 1329k 0 0:00:11 0:00:03 0:00:08 1329k
48 14.5M 48 7213k 0 0 1471k 0 0:00:10 0:00:04 0:00:06 1471k
64 14.5M 64 9675k 0 0 1638k 0 0:00:09 0:00:05 0:00:04 1988k
87 14.5M 87 12.6M 0 0 1885k 0 0:00:07 0:00:06 0:00:01 2349k
100 14.5M 100 14.5M 0 0 2014k 0 0:00:07 0:00:07 --:--:-- 2655k
install for i386
* installing *source* package 'EGAD' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'EGAD'
finding HTML links ... done
GO.human html
GO.mouse html
GO.voc html
assortativity html
atrr.human html
attr.mouse html
auc_multifunc html
auprc html
auroc_analytic html
biogrid html
build_binary_network html
build_coexp_GEOID html
build_coexp_expressionSet html
build_coexp_network html
build_semantic_similarity_network html
build_weighted_network html
calculate_multifunc html
conv_smoother html
example_annotations html
example_binary_network html
example_coexpression html
example_neighbor_voting html
extend_network html
filter_network html
filter_network_cols html
filter_network_rows html
filter_orthologs html
fmeasure html
genes html
get_auc html
get_biogrid html
get_counts html
get_density html
get_expression_data_gemma html
get_expression_matrix_from_GEO html
get_phenocarta html
get_prc html
get_roc html
make_annotations html
make_gene_network html
make_genelist html
make_transparent html
neighbor_voting html
node_degree html
ortho html
pheno html
plot_densities html
plot_density_compare html
plot_distribution html
plot_network_heatmap html
plot_prc html
plot_roc html
plot_roc_overlay html
plot_value_compare html
predictions html
repmat html
run_GBA html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'EGAD' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EGAD' as EGAD_1.20.0.zip
* DONE (EGAD)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'EGAD' successfully unpacked and MD5 sums checked