| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:05:57 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the AnnotationFuncs package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnnotationFuncs.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 65/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Stefan McKinnon Edwards
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: AnnotationFuncs |
| Version: 1.42.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AnnotationFuncs_1.42.0.tar.gz && rm -rf AnnotationFuncs.buildbin-libdir && mkdir AnnotationFuncs.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationFuncs.buildbin-libdir AnnotationFuncs_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AnnotationFuncs_1.42.0.zip && rm AnnotationFuncs_1.42.0.tar.gz AnnotationFuncs_1.42.0.zip |
| StartedAt: 2021-10-14 08:05:04 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:05:38 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 33.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AnnotationFuncs_1.42.0.tar.gz && rm -rf AnnotationFuncs.buildbin-libdir && mkdir AnnotationFuncs.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationFuncs.buildbin-libdir AnnotationFuncs_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AnnotationFuncs_1.42.0.zip && rm AnnotationFuncs_1.42.0.tar.gz AnnotationFuncs_1.42.0.zip
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install for i386
* installing *source* package 'AnnotationFuncs' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'AnnotationFuncs'
finding HTML links ... done
AnnotationFuncs-package html
dbEscapeString2 html
getEvidenceCodes html
getOrthologs html
getTableName2 html
mapLists html
pickGO html
pickRef2 html
pickRefSeq html
removeNAs html
translate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'AnnotationFuncs' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'AnnotationFuncs' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'AnnotationFuncs' ...
** testing if installed package can be loaded
Warning: Package 'AnnotationFuncs' is deprecated and will be removed from
Bioconductor version 3.14
* MD5 sums
packaged installation of 'AnnotationFuncs' as AnnotationFuncs_1.42.0.zip
* DONE (AnnotationFuncs)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'AnnotationFuncs' successfully unpacked and MD5 sums checked