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INSTALL report for vulcan on tokay2

This page was generated on 2020-10-17 11:57:59 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE vulcan PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1879/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
vulcan 1.10.0
Federico M. Giorgi
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/vulcan
Branch: RELEASE_3_11
Last Commit: 3077052
Last Changed Date: 2020-04-27 15:10:51 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: vulcan
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/vulcan_1.10.0.tar.gz && rm -rf vulcan.buildbin-libdir && mkdir vulcan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=vulcan.buildbin-libdir vulcan_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL vulcan_1.10.0.zip && rm vulcan_1.10.0.tar.gz vulcan_1.10.0.zip
StartedAt: 2020-10-16 19:26:28 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:28:24 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 115.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/vulcan_1.10.0.tar.gz && rm -rf vulcan.buildbin-libdir && mkdir vulcan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=vulcan.buildbin-libdir vulcan_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL vulcan_1.10.0.zip && rm vulcan_1.10.0.tar.gz vulcan_1.10.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  144k  100  144k    0     0  1250k      0 --:--:-- --:--:-- --:--:-- 1326k

install for i386

* installing *source* package 'vulcan' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'vulcan'
    finding HTML links ... done
    average_fragment_length                 html  
    corr2p                                  html  
    densityauc                              html  
    dpareto                                 html  
    fisherp                                 html  
    gsea                                    html  
    kmgformat                               html  
    null_gsea                               html  
    p2corr                                  html  
    p2z                                     html  
    pareto.fit                              html  
    plot_gsea                               html  
    ppareto                                 html  
    rea                                     html  
    slice                                   html  
    stouffer                                html  
    textplot2                               html  
    val2col                                 html  
    vulcan                                  html  
    vulcan.annotate                         html  
    vulcan.import                           html  
    vulcan.normalize                        html  
    vulcan.pathways                         html  
    wstouffer                               html  
    z2p                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'vulcan' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'vulcan' as vulcan_1.10.0.zip
* DONE (vulcan)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'vulcan' successfully unpacked and MD5 sums checked