David Mosen-Ansorena
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/seqCNA |
| Branch: RELEASE_3_11 |
| Last Commit: b37683d |
| Last Changed Date: 2020-04-27 14:35:21 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:47 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE seqCNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1628/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| seqCNA 1.34.0 David Mosen-Ansorena
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: seqCNA |
| Version: 1.34.0 |
| Command: rm -rf seqCNA.buildbin-libdir && mkdir seqCNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqCNA.buildbin-libdir seqCNA_1.34.0.tar.gz |
| StartedAt: 2020-10-17 11:38:34 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 11:39:10 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 36.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: seqCNA_1.34.0.zip |
| PackageFileSize: 1.935 MiB |
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### Running command:
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### rm -rf seqCNA.buildbin-libdir && mkdir seqCNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqCNA.buildbin-libdir seqCNA_1.34.0.tar.gz
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install for i386
* installing *source* package 'seqCNA' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c seqCNA.cpp -o seqCNA.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o seqCNA.dll tmp.def seqCNA.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/seqCNA.buildbin-libdir/00LOCK-seqCNA/00new/seqCNA/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'seqCNA'
finding HTML links ... done
SeqCNAInfo-class html
applyFilters html
applyThresholds html
plotCNProfile html
readSeqsumm html
runGLAD html
runSeqnorm html
runSeqsumm html
seqCNA-package html
seqsumm_HCC1143 html
writeCNProfile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'seqCNA' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c seqCNA.cpp -o seqCNA.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o seqCNA.dll tmp.def seqCNA.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/seqCNA.buildbin-libdir/seqCNA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'seqCNA' as seqCNA_1.34.0.zip
* DONE (seqCNA)