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BUILD BIN report for selectKSigs on tokay2

This page was generated on 2020-10-17 11:57:47 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE selectKSigs PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1619/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
selectKSigs 1.0.0
Zhi Yang
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/selectKSigs
Branch: RELEASE_3_11
Last Commit: 42f8fa7
Last Changed Date: 2020-04-27 15:32:49 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: selectKSigs
Version: 1.0.0
Command: rm -rf selectKSigs.buildbin-libdir && mkdir selectKSigs.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=selectKSigs.buildbin-libdir selectKSigs_1.0.0.tar.gz
StartedAt: 2020-10-17 11:37:57 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:38:58 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 60.6 seconds
RetCode: 0
Status:  OK  
PackageFile: selectKSigs_1.0.0.zip
PackageFileSize: 1.047 MiB

Command output

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###
### Running command:
###
###   rm -rf selectKSigs.buildbin-libdir && mkdir selectKSigs.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=selectKSigs.buildbin-libdir selectKSigs_1.0.0.tar.gz
###
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install for i386

* installing *source* package 'selectKSigs' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c EMalgorithm.cpp -o EMalgorithm.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c convertFromToVector.cpp -o convertFromToVector.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o selectKSigs.dll tmp.def EMalgorithm.o RcppExports.o convertFromToVector.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/selectKSigs.buildbin-libdir/00LOCK-selectKSigs/00new/selectKSigs/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'selectKSigs'
    finding HTML links ... done
    Calculate_Likelihood_test               html  
    calcPMSLikelihood                       html  
    convertFromTurbo_F                      html  
    convertFromTurbo_Q                      html  
    convertToTurbo_F                        html  
    convertToTurbo_Q                        html  
    cv_PMSignature                          html  
    getBG                                   html  
    getCounts                               html  
    getExposures                            html  
    getFeatureVec                           html  
    getFeatures                             html  
    getK                                    html  
    getLL                                   html  
    getLogLikelihoodC                       html  
    getSamplelist                           html  
    getSamplelistG                          html  
    getSignatures                           html  
    getTranscription                        html  
    select_kth_fold                         html  
    splitG                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'selectKSigs' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c EMalgorithm.cpp -o EMalgorithm.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c convertFromToVector.cpp -o convertFromToVector.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o selectKSigs.dll tmp.def EMalgorithm.o RcppExports.o convertFromToVector.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/selectKSigs.buildbin-libdir/selectKSigs/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'selectKSigs' as selectKSigs_1.0.0.zip
* DONE (selectKSigs)