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INSTALL report for scsR on tokay2

This page was generated on 2020-10-17 11:57:46 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE scsR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1613/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scsR 1.24.0
Andrea Franceschini , Roger Meier , Christian von Mering
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/scsR
Branch: RELEASE_3_11
Last Commit: 879b7c3
Last Changed Date: 2020-04-27 14:38:42 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: scsR
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/scsR_1.24.0.tar.gz && rm -rf scsR.buildbin-libdir && mkdir scsR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scsR.buildbin-libdir scsR_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL scsR_1.24.0.zip && rm scsR_1.24.0.tar.gz scsR_1.24.0.zip
StartedAt: 2020-10-16 17:33:02 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:34:05 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 63.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/scsR_1.24.0.tar.gz && rm -rf scsR.buildbin-libdir && mkdir scsR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scsR.buildbin-libdir scsR_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL scsR_1.24.0.zip && rm scsR_1.24.0.tar.gz scsR_1.24.0.zip
###
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100 1790k  100 1790k    0     0  19.3M      0 --:--:-- --:--:-- --:--:-- 20.8M

install for i386

* installing *source* package 'scsR' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scsR'
    finding HTML links ... done
    OPIrsa                                  html  
    OPIrsaScore                             html  
    add_rank_col                            html  
    add_seed                                html  
    benchmark_shared_hits                   html  
    bydf                                    html  
    check_consistency                       html  
    compare_sorted_geneSets                 html  
    create_sd_matrix                        html  
    delColDf                                html  
    delete_undefined_rows                   html  
    enrichment_geneSet                      html  
    enrichment_heatmap                      html  
    get_sd_quant                            html  
    get_seed_oligos_df                      html  
    intersectAll                            html  
    launch_RSA                              html  
    median_replicates                       html  
    miRBase_20                              html  
    plot_screen_hits                        html  
    plot_seeds_methods                      html  
    randomSortOnVal                         html  
    randomizeInner                          html  
    removeSharedOffTargets                  html  
    renameColDf                             html  
    replace_non_null_elements               html  
    seed_correction                         html  
    seed_correction_pooled                  html  
    seed_removal                            html  
    seeds_analysis                          html  
    sortInner                               html  
    split_df                                html  
    transcribe_seqs                         html  
    uuk_screen                              html  
    uuk_screen_dh                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'scsR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scsR' as scsR_1.24.0.zip
* DONE (scsR)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'scsR' successfully unpacked and MD5 sums checked