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INSTALL report for plgem on tokay2

This page was generated on 2020-10-17 11:57:25 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE plgem PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1320/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
plgem 1.60.0
Norman Pavelka
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/plgem
Branch: RELEASE_3_11
Last Commit: 2439920
Last Changed Date: 2020-04-27 14:11:06 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: plgem
Version: 1.60.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/plgem_1.60.0.tar.gz && rm -rf plgem.buildbin-libdir && mkdir plgem.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=plgem.buildbin-libdir plgem_1.60.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL plgem_1.60.0.zip && rm plgem_1.60.0.tar.gz plgem_1.60.0.zip
StartedAt: 2020-10-16 16:58:28 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 16:59:22 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 54.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/plgem_1.60.0.tar.gz && rm -rf plgem.buildbin-libdir && mkdir plgem.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=plgem.buildbin-libdir plgem_1.60.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL plgem_1.60.0.zip && rm plgem_1.60.0.tar.gz plgem_1.60.0.zip
###
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100  159k  100  159k    0     0  2504k      0 --:--:-- --:--:-- --:--:-- 2790k

install for i386

* installing *source* package 'plgem' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'plgem'
    finding HTML links ... done
    LPSeset                                 html  
    plgem.deg                               html  
    plgem.fit                               html  
    plgem.obsStn                            html  
    plgem.pValue                            html  
    plgem.resampledStn                      html  
    plgem.write.summary                     html  
    run.plgem                               html  
    setGpar                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'plgem' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'plgem' as plgem_1.60.0.zip
* DONE (plgem)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'plgem' successfully unpacked and MD5 sums checked