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BUILD BIN report for pdInfoBuilder on tokay2

This page was generated on 2020-10-17 11:57:22 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE pdInfoBuilder PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1288/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pdInfoBuilder 1.52.0
Benilton Carvalho
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/pdInfoBuilder
Branch: RELEASE_3_11
Last Commit: a4c3e8e
Last Changed Date: 2020-04-27 14:14:32 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pdInfoBuilder
Version: 1.52.0
Command: rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.52.0.tar.gz
StartedAt: 2020-10-17 11:14:49 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:15:33 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 44.4 seconds
RetCode: 0
Status:  OK  
PackageFile: pdInfoBuilder_1.52.0.zip
PackageFileSize: 832.5 KiB

Command output

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### Running command:
###
###   rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.52.0.tar.gz
###
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install for i386

* installing *source* package 'pdInfoBuilder' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pdInfoBuilder.c -o pdInfoBuilder.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/pdInfoBuilder.buildbin-libdir/00LOCK-pdInfoBuilder/00new/pdInfoBuilder/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder'
** help
*** installing help indices
  converting help for package 'pdInfoBuilder'
    finding HTML links ... done
    AffyClariomSPDInfoPkgSeed-class         html  
    AffyExpressionPDInfoPkgSeed-class       html  
    AffySNPCNVPDInfoPkgSeed-class           html  
    AffySNPCNVPDInfoPkgSeed2-class          html  
    AffySNPPDInfoPkgSeed-class              html  
    AffySNPPDInfoPkgSeed2-class             html  
    AffySTPDInfoPkgSeed-class               html  
    AffyTilingPDInfoPkgSeed-class           html  
    GenericArrayFunctions                   html  
    NgsExpressionPDInfoPkgSeed-class        html  
    NgsTilingPDInfoPkgSeed-class            html  
    NimbleGenPDInfoPkgSeed-class            html  
    chipName                                html  
    getGeometry                             html  
    makePdInfoPackage                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder'
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'pdInfoBuilder' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pdInfoBuilder.c -o pdInfoBuilder.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs/x64
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder'
* MD5 sums
packaged installation of 'pdInfoBuilder' as pdInfoBuilder_1.52.0.zip
* DONE (pdInfoBuilder)