Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMN[O]PQRSTUVWXYZ

INSTALL report for odseq on tokay2

This page was generated on 2020-10-17 11:57:17 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE odseq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1213/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
odseq 1.16.0
José Jiménez
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/odseq
Branch: RELEASE_3_11
Last Commit: 8febe95
Last Changed Date: 2020-04-27 14:56:36 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: odseq
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/odseq_1.16.0.tar.gz && rm -rf odseq.buildbin-libdir && mkdir odseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=odseq.buildbin-libdir odseq_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL odseq_1.16.0.zip && rm odseq_1.16.0.tar.gz odseq_1.16.0.zip
StartedAt: 2020-10-16 17:42:33 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:43:09 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 36.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/odseq_1.16.0.tar.gz && rm -rf odseq.buildbin-libdir && mkdir odseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=odseq.buildbin-libdir odseq_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL odseq_1.16.0.zip && rm odseq_1.16.0.tar.gz odseq_1.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 41251  100 41251    0     0   113k      0 --:--:-- --:--:-- --:--:--  116k

install for i386

* installing *source* package 'odseq' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'odseq'
    finding HTML links ... done
    odmix                                   html  
    odseq-package                           html  
    odseq                                   html  
    odseq_unaligned                         html  
    seqs                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'odseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'odseq' as odseq_1.16.0.zip
* DONE (odseq)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'odseq' successfully unpacked and MD5 sums checked