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BUILD report for netReg on malbec2

This page was generated on 2020-10-17 11:55:15 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE netReg PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1190/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netReg 1.12.0
Simon Dirmeier
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/netReg
Branch: RELEASE_3_11
Last Commit: ae63520
Last Changed Date: 2020-04-27 15:06:29 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  TIMEOUT  ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: netReg
Version: 1.12.0
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data netReg
StartedAt: 2020-10-16 20:38:46 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 20:39:52 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 66.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data netReg
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* checking for file ‘netReg/DESCRIPTION’ ... OK
* preparing ‘netReg’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘netReg.Rmd’ using rmarkdown
Quitting from lines 99-106 (netReg.Rmd) 
Error: processing vignette 'netReg.Rmd' failed with diagnostics:
RuntimeError: `loss` passed to Optimizer.compute_gradients should be a function when eager execution is enabled.

Detailed traceback: 
  File "//usr/local/lib/python3.6/dist-packages/tensorflow_core/python/training/optimizer.py", line 403, in minimize
    grad_loss=grad_loss)
  File "//usr/local/lib/python3.6/dist-packages/tensorflow_core/python/training/optimizer.py", line 481, in compute_gradients
    "`loss` passed to Optimizer.compute_gradients should "

--- failed re-building ‘netReg.Rmd’

SUMMARY: processing the following file failed:
  ‘netReg.Rmd’

Error: Vignette re-building failed.
Execution halted