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INSTALL report for microRNA on malbec2

This page was generated on 2020-10-17 11:55:09 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE microRNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1079/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
microRNA 1.46.0
"James F. Reid"
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/microRNA
Branch: RELEASE_3_11
Last Commit: c2c70f2
Last Changed Date: 2020-04-27 14:18:04 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: microRNA
Version: 1.46.0
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL microRNA
StartedAt: 2020-10-16 16:15:19 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 16:15:31 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 11.6 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL microRNA
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* installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’
* installing *source* package ‘microRNA’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c longest_common_substring.cpp -o longest_common_substring.o
longest_common_substring.cpp: In function ‘SEXPREC* longest_common_substring(SEXP)’:
longest_common_substring.cpp:55:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (i == len[index] - 1) { // ignore null termination character
             ~~^~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o microRNA.so longest_common_substring.o -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-microRNA/00new/microRNA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (microRNA)