Back to Multiple platform build/check report for BioC 3.11
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CHECK report for graper on machv2

This page was generated on 2020-10-17 11:58:38 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE graper PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 770/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.4.0
Britta Velten
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/graper
Branch: RELEASE_3_11
Last Commit: aa82f86
Last Changed Date: 2020-04-27 15:22:20 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK [ OK ] OK UNNEEDED, same version exists in internal repository

Summary

Package: graper
Version: 1.4.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings graper_1.4.0.tar.gz
StartedAt: 2020-10-17 01:49:28 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 01:50:53 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 85.3 seconds
RetCode: 0
Status:  OK 
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings graper_1.4.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.11-bioc/meat/graper.Rcheck’
* using R version 4.0.3 (2020-10-10)
* using platform: x86_64-apple-darwin17.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.11-bioc/meat/graper.Rcheck/00check.log’
for details.



Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c fit_graper.cpp -o fit_graper.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.0/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin17.0 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-830.764
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.071
ELB improved by 261.693

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.553
ELB improved by 61.5178

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.256
ELB improved by 46.2977

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.027
ELB improved by 21.2281

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.686
ELB improved by 8.34097

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.625
ELB improved by 5.06164

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.293
ELB improved by 4.33149

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.806
ELB improved by 4.48751

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.786
ELB improved by 5.02026

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.217
ELB improved by 5.56896

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.557
ELB improved by 5.65967

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.633
ELB improved by 4.92375

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.048
ELB improved by 3.58493

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.754
ELB improved by 2.29408

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.327
ELB improved by 1.42675

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.387
ELB improved by 0.940656

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.708
ELB improved by 0.678585

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.177
ELB improved by 0.531389

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.733
ELB improved by 0.443885

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.343
ELB improved by 0.389423

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.989
ELB improved by 0.354124

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.659
ELB improved by 0.330259

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.346
ELB improved by 0.313553

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.044
ELB improved by 0.301876

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.749
ELB improved by 0.294466

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.458
ELB improved by 0.291256

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.166
ELB improved by 0.291963

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.871
ELB improved by 0.294814

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.575
ELB improved by 0.295965

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.283
ELB improved by 0.291729

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.001
ELB improved by 0.282269

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.73
ELB improved by 0.271199

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.468
ELB improved by 0.261723

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.213
ELB improved by 0.255066

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.962
ELB improved by 0.251332

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.711
ELB improved by 0.250374

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.459
ELB improved by 0.252028

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.204
ELB improved by 0.255949

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.942
ELB improved by 0.261132

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.677
ELB improved by 0.265281

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.412
ELB improved by 0.264842

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.155
ELB improved by 0.256919

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.913
ELB improved by 0.241919

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.69
ELB improved by 0.223198

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.486
ELB improved by 0.204004

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.3
ELB improved by 0.185845

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.131
ELB improved by 0.168999

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.978
ELB improved by 0.153328

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.839
ELB improved by 0.138647

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.715
ELB improved by 0.124812

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.603
ELB improved by 0.111744

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.503
ELB improved by 0.0994245

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.416
ELB improved by 0.087887

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.338
ELB improved by 0.0771965

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.271
ELB improved by 0.0674222

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.212
ELB improved by 0.0586137

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.162
ELB improved by 0.0507864

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.118
ELB improved by 0.0439173

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.08
ELB improved by 0.0379507

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.047
ELB improved by 0.032808

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.018
ELB improved by 0.0283984

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.994
ELB improved by 0.0246284

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.972
ELB improved by 0.0214089

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.954
ELB improved by 0.0186584

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.937
ELB improved by 0.0163057

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.923
ELB improved by 0.0142893

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.911
ELB improved by 0.0125575

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.9
ELB improved by 0.0110669

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.89
ELB improved by 0.00978125

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-808.963
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.623
ELB improved by 234.341

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.679
ELB improved by 56.9439

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.533
ELB improved by 46.1456

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.32
ELB improved by 26.2133

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.041
ELB improved by 11.2789

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.869
ELB improved by 5.17239

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.45
ELB improved by 3.41825

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.501
ELB improved by 2.9499

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.574
ELB improved by 2.92697

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.456
ELB improved by 3.11796

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.025
ELB improved by 3.43032

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.24
ELB improved by 3.78491

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.201
ELB improved by 4.03949

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.199
ELB improved by 4.00193

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.612
ELB improved by 3.58734

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.691
ELB improved by 2.92074

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.493
ELB improved by 2.19808

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.95
ELB improved by 1.54258

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.929
ELB improved by 1.02165

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.263
ELB improved by 0.665246

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.817
ELB improved by 0.446791

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.498
ELB improved by 0.318602

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.255
ELB improved by 0.243376

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.056
ELB improved by 0.198203

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.886
ELB improved by 0.170186

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.734
ELB improved by 0.152308

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.593
ELB improved by 0.140789

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.459
ELB improved by 0.133575

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.33
ELB improved by 0.129521

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.202
ELB improved by 0.127907

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.074
ELB improved by 0.128135

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.944
ELB improved by 0.129486

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.813
ELB improved by 0.131039

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.682
ELB improved by 0.131871

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.55
ELB improved by 0.131548

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.42
ELB improved by 0.130426

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.29
ELB improved by 0.129347

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.161
ELB improved by 0.129033

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.031
ELB improved by 0.129807

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.9
ELB improved by 0.131713

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.765
ELB improved by 0.134743

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.626
ELB improved by 0.138973

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.481
ELB improved by 0.14461

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.329
ELB improved by 0.152005

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.168
ELB improved by 0.161665

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.993
ELB improved by 0.174287

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.803
ELB improved by 0.190807

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.59
ELB improved by 0.212473

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.349
ELB improved by 0.240927

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.071
ELB improved by 0.27826

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.744
ELB improved by 0.326962

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.354
ELB improved by 0.389561

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.887
ELB improved by 0.467636

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.327
ELB improved by 0.559952

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.667
ELB improved by 0.660112

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.911
ELB improved by 0.75527

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.084
ELB improved by 0.827842

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.223
ELB improved by 0.860645

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.379
ELB improved by 0.843845

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.599
ELB improved by 0.779855

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.917
ELB improved by 0.681909

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.35
ELB improved by 0.567591

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.896
ELB improved by 0.453468

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.544
ELB improved by 0.351975

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.276
ELB improved by 0.268756

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.072
ELB improved by 0.203182

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.92
ELB improved by 0.152045

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.808
ELB improved by 0.112434

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.726
ELB improved by 0.0823429

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.665
ELB improved by 0.0601594

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.621
ELB improved by 0.0442816

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.588
ELB improved by 0.0331395

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.563
ELB improved by 0.0253709

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.543
ELB improved by 0.019923

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.527
ELB improved by 0.0160461

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.513
ELB improved by 0.0132324

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.502
ELB improved by 0.0111456

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.493
ELB improved by 0.00956466

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.648
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-591.198
ELB improved by 263.45

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.497
ELB improved by 63.7007

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.608
ELB improved by 49.8894

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.869
ELB improved by 25.7389

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.488
ELB improved by 9.38125

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.994
ELB improved by 4.49417

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.788
ELB improved by 3.20575

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.854
ELB improved by 2.93388

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.703
ELB improved by 3.1514

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.017
ELB improved by 3.68527

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.654
ELB improved by 4.3631

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.793
ELB improved by 4.86092

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.043
ELB improved by 4.74989

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.149
ELB improved by 3.89408

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.448
ELB improved by 2.70168

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.757
ELB improved by 1.6907

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.718
ELB improved by 1.03929

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.051
ELB improved by 0.667124

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.594
ELB improved by 0.456369

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.263
ELB improved by 0.331044

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.011
ELB improved by 0.251716

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.813
ELB improved by 0.198657

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.651
ELB improved by 0.161565

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.517
ELB improved by 0.134694

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.402
ELB improved by 0.114631

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.303
ELB improved by 0.0992503

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.215
ELB improved by 0.087176

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.138
ELB improved by 0.0774937

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.068
ELB improved by 0.0695805

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.005
ELB improved by 0.0630034

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.948
ELB improved by 0.0574554

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.895
ELB improved by 0.0527148

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.847
ELB improved by 0.048619

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.802
ELB improved by 0.0450463

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.76
ELB improved by 0.0419042

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.721
ELB improved by 0.0391214

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.684
ELB improved by 0.0366419

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.649
ELB improved by 0.0344211

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.617
ELB improved by 0.0324229

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.586
ELB improved by 0.030618

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.557
ELB improved by 0.028982

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.53
ELB improved by 0.0274947

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.504
ELB improved by 0.0261389

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.479
ELB improved by 0.0249002

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.455
ELB improved by 0.0237662

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.432
ELB improved by 0.0227263

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.411
ELB improved by 0.0217714

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.39
ELB improved by 0.0208937

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.37
ELB improved by 0.0200864

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.35
ELB improved by 0.0193438

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.332
ELB improved by 0.0186608

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.314
ELB improved by 0.0180333

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.296
ELB improved by 0.0174577

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.279
ELB improved by 0.0169313

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.263
ELB improved by 0.0164517

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.247
ELB improved by 0.0160173

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.231
ELB improved by 0.0156269

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.216
ELB improved by 0.0152802

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.201
ELB improved by 0.0149772

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.186
ELB improved by 0.0147189

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.172
ELB improved by 0.014507

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.157
ELB improved by 0.014344

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.143
ELB improved by 0.0142338

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.129
ELB improved by 0.0141812

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.115
ELB improved by 0.0141929

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.1
ELB improved by 0.0142772

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.086
ELB improved by 0.0144448

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.071
ELB improved by 0.0147087

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.056
ELB improved by 0.015085

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.041
ELB improved by 0.0155925

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.024
ELB improved by 0.016253

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.007
ELB improved by 0.01709

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.989
ELB improved by 0.0181269

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.97
ELB improved by 0.0193838

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.949
ELB improved by 0.0208731

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.926
ELB improved by 0.0225948

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.902
ELB improved by 0.024534

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.875
ELB improved by 0.0266651

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.846
ELB improved by 0.0289654

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.815
ELB improved by 0.0314401

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.78
ELB improved by 0.0341522

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.743
ELB improved by 0.0372498

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.702
ELB improved by 0.040983

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.657
ELB improved by 0.0457065

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.605
ELB improved by 0.05186

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.545
ELB improved by 0.0598936

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.475
ELB improved by 0.0700702

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.393
ELB improved by 0.0820904

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.298
ELB improved by 0.0946847

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.192
ELB improved by 0.105707

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.079
ELB improved by 0.113162

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.963
ELB improved by 0.116413

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.846
ELB improved by 0.116213

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.733
ELB improved by 0.113779

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.623
ELB improved by 0.110117

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.517
ELB improved by 0.105894

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.415
ELB improved by 0.101526

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.318
ELB improved by 0.097253

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.225
ELB improved by 0.0931903

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.135
ELB improved by 0.089364

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.05
ELB improved by 0.0857438

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.967
ELB improved by 0.0822698

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.888
ELB improved by 0.078875

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.813
ELB improved by 0.0755018

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.741
ELB improved by 0.0721142

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.672
ELB improved by 0.0687069

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.607
ELB improved by 0.0653126

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.545
ELB improved by 0.0620121

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.486
ELB improved by 0.0589549

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.429
ELB improved by 0.0564046

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.375
ELB improved by 0.054847

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.319
ELB improved by 0.0552536

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.26
ELB improved by 0.0597273

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.187
ELB improved by 0.0730171

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.081
ELB improved by 0.105115

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.912
ELB improved by 0.169203

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.66
ELB improved by 0.251973

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.37
ELB improved by 0.289928

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.101
ELB improved by 0.269177

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.865
ELB improved by 0.23577

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.652
ELB improved by 0.213463

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.448
ELB improved by 0.204403

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.252
ELB improved by 0.195701

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.081
ELB improved by 0.17124

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.947
ELB improved by 0.133552

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.849
ELB improved by 0.097945

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.777
ELB improved by 0.0720845

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.722
ELB improved by 0.0549567

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.679
ELB improved by 0.0435399

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.643
ELB improved by 0.0355958

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.613
ELB improved by 0.0298224

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.588
ELB improved by 0.0254858

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.565
ELB improved by 0.0221493

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.546
ELB improved by 0.0195317

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.529
ELB improved by 0.0174403

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.513
ELB improved by 0.0157386

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.498
ELB improved by 0.0143282

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.485
ELB improved by 0.013138

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.473
ELB improved by 0.0121163

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.462
ELB improved by 0.0112258

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.452
ELB improved by 0.0104395

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.442
ELB improved by 0.00973758

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.777
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.569
ELB improved by 310.207

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.662
ELB improved by 56.9068

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.108
ELB improved by 33.5542

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.163
ELB improved by 15.9456

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.153
ELB improved by 7.0094

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.063
ELB improved by 4.08999

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.459
ELB improved by 3.60444

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.9
ELB improved by 3.55842

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.248
ELB improved by 3.65255

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.504
ELB improved by 3.74363

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.842
ELB improved by 3.66175

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.564
ELB improved by 3.27796

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.92
ELB improved by 2.64403

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.94
ELB improved by 1.98026

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.482
ELB improved by 1.45823

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.392
ELB improved by 1.08998

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.568
ELB improved by 0.823534

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.939
ELB improved by 0.629055

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.445
ELB improved by 0.494004

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.041
ELB improved by 0.404598

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.694
ELB improved by 0.346214

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.387
ELB improved by 0.307486

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.106
ELB improved by 0.281022

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.844
ELB improved by 0.262382

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.595
ELB improved by 0.248953

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.355
ELB improved by 0.239189

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.123
ELB improved by 0.232171

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.896
ELB improved by 0.227372

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.671
ELB improved by 0.224496

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.448
ELB improved by 0.223349

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.223688

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.999
ELB improved by 0.225069

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.773
ELB improved by 0.226789

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.544
ELB improved by 0.228032

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.316
ELB improved by 0.228213

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.089
ELB improved by 0.227253

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.863
ELB improved by 0.225547

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.64
ELB improved by 0.223695

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.418
ELB improved by 0.22225

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.196
ELB improved by 0.221604

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.974
ELB improved by 0.221967

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.751
ELB improved by 0.223372

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.525
ELB improved by 0.225681

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.296
ELB improved by 0.228584

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.231599

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.831
ELB improved by 0.234073

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.595
ELB improved by 0.235212

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.361
ELB improved by 0.234143

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.131
ELB improved by 0.230024

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.909
ELB improved by 0.2222

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.699
ELB improved by 0.210381

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.504
ELB improved by 0.194775

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.328
ELB improved by 0.176118

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.172
ELB improved by 0.155565

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.038
ELB improved by 0.134458

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.924
ELB improved by 0.114057

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.828
ELB improved by 0.0953341

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.749
ELB improved by 0.0788797

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.685
ELB improved by 0.0649184

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.631
ELB improved by 0.0533987

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.587
ELB improved by 0.0441012

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.55
ELB improved by 0.0367339

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.519
ELB improved by 0.0310008

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.493
ELB improved by 0.0266439

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.469
ELB improved by 0.0234667

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.448
ELB improved by 0.0213483

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.428
ELB improved by 0.0202534

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.407
ELB improved by 0.0202445

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.386
ELB improved by 0.0214945

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.362
ELB improved by 0.0242857

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.333
ELB improved by 0.0289603

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.297
ELB improved by 0.0357399

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.253
ELB improved by 0.0443253

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.199
ELB improved by 0.0533454

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.139
ELB improved by 0.0602137

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.077
ELB improved by 0.0622312

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.018
ELB improved by 0.058572

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.967
ELB improved by 0.0510105

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.925
ELB improved by 0.0424085

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.89
ELB improved by 0.0348457

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.861
ELB improved by 0.0290769

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.836
ELB improved by 0.0249799

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.814
ELB improved by 0.0221068

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.794
ELB improved by 0.0199969

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.775
ELB improved by 0.0182901

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.759
ELB improved by 0.0167477

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.744
ELB improved by 0.0152391

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.73
ELB improved by 0.01372

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.718
ELB improved by 0.0122052

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.707
ELB improved by 0.0107398

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.697
ELB improved by 0.00937361

ELB converged
══ testthat results  ═══════════════════════════════════════════════════════════
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
> 
> proc.time()
   user  system elapsed 
  3.854   0.264   4.097 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0770.0280.107
getPIPs0.0650.0240.088
graper0.1110.0290.139
makeExampleData0.0120.0010.014
makeExampleDataWithUnequalGroups0.0180.0010.019
plotELBO0.3670.0310.399
plotGroupPenalties1.0160.0751.091
plotPosterior0.8100.0320.844
predict.graper2.7060.1182.829
print.graper0.0700.0220.092