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INSTALL report for decontam on tokay2

This page was generated on 2020-10-17 11:56:25 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE decontam PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 437/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
decontam 1.8.0
Benjamin Callahan
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/decontam
Branch: RELEASE_3_11
Last Commit: c6931b3
Last Changed Date: 2020-04-27 15:15:38 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: decontam
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/decontam_1.8.0.tar.gz && rm -rf decontam.buildbin-libdir && mkdir decontam.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=decontam.buildbin-libdir decontam_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL decontam_1.8.0.zip && rm decontam_1.8.0.tar.gz decontam_1.8.0.zip
StartedAt: 2020-10-16 17:16:01 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:16:27 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 26.3 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/decontam_1.8.0.tar.gz && rm -rf decontam.buildbin-libdir && mkdir decontam.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=decontam.buildbin-libdir decontam_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL decontam_1.8.0.zip && rm decontam_1.8.0.tar.gz decontam_1.8.0.zip
###
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100  770k  100  770k    0     0  5542k      0 --:--:-- --:--:-- --:--:-- 5793k

install for i386

* installing *source* package 'decontam' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'decontam'
    finding HTML links ... done
    isContaminant                           html  
    isNotContaminant                        html  
    plot_condition                          html  
    plot_frequency                          html  
    finding level-2 HTML links ... done

** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'decontam' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'decontam' as decontam_1.8.0.zip
* DONE (decontam)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'decontam' successfully unpacked and MD5 sums checked