Back to Multiple platform build/check report for BioC 3.11
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for anamiR on tokay2

This page was generated on 2020-10-17 11:56:05 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE anamiR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 53/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
anamiR 1.16.0
Ti-Tai Wang
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/anamiR
Branch: RELEASE_3_11
Last Commit: f1b60e6
Last Changed Date: 2020-04-27 15:02:52 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: anamiR
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/anamiR_1.16.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL anamiR_1.16.0.zip && rm anamiR_1.16.0.tar.gz anamiR_1.16.0.zip
StartedAt: 2020-10-16 19:14:54 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:17:05 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 131.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/anamiR_1.16.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL anamiR_1.16.0.zip && rm anamiR_1.16.0.tar.gz anamiR_1.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 10.4M  100 10.4M    0     0  58.4M      0 --:--:-- --:--:-- --:--:-- 60.5M

install for i386

* installing *source* package 'anamiR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
** help
*** installing help indices
  converting help for package 'anamiR'
    finding HTML links ... done
    GSEA_ana                                html  
    GSEA_res                                html  
    anamiR                                  html  
    database_support                        html  
    differExp_continuous                    html  
    differExp_discrete                      html  
    egSymb                                  html  
    enrichment                              html  
    heat_vis                                html  
    miR_converter                           html  
    mirna                                   html  
    mrna                                    html  
    msigdb.gs                               html  
    multi_Differ                            html  
    negative_cor                            html  
    normalization                           html  
    pheno.mirna                             html  
    pheno.mrna                              html  
    table_pre                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
Warning: Package 'anamiR' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
Warning: Package 'anamiR' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'anamiR' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
Warning: Package 'anamiR' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'anamiR' as anamiR_1.16.0.zip
* DONE (anamiR)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'anamiR' successfully unpacked and MD5 sums checked