Back to Multiple platform build/check report for BioC 3.11
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for adaptest on tokay2

This page was generated on 2020-10-17 11:56:03 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE adaptest PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 18/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
adaptest 1.8.0
Weixin Cai
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/adaptest
Branch: RELEASE_3_11
Last Commit: bb5a4e6
Last Changed Date: 2020-04-27 15:15:06 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: adaptest
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/adaptest_1.8.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL adaptest_1.8.0.zip && rm adaptest_1.8.0.tar.gz adaptest_1.8.0.zip
StartedAt: 2020-10-16 18:02:16 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:03:26 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 70.4 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/adaptest_1.8.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL adaptest_1.8.0.zip && rm adaptest_1.8.0.tar.gz adaptest_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1090k  100 1090k    0     0  14.2M      0 --:--:-- --:--:-- --:--:-- 15.4M

install for i386

* installing *source* package 'adaptest' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'adaptest'
    finding HTML links ... done
    adapTMLE-class                          html  
    adaptest                                html  
    adaptest_old                            html  
    bioadaptest                             html  
    cv_param_est                            html  
    data_adapt                              html  
    get_composition                         html  
    get_pval                                html  
    get_results_adaptmle                    html  
    get_significant_biomarker               html  
    plot.data_adapt                         html  
    print.data_adapt                        html  
    rank_DE                                 html  
    rank_ttest                              html  
    simulated_array                         html  
    simulated_treatment                     html  
    summary.data_adapt                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'adaptest' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'adaptest' as adaptest_1.8.0.zip
* DONE (adaptest)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'adaptest' successfully unpacked and MD5 sums checked