Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

INSTALL report for TxRegInfra on tokay2

This page was generated on 2020-10-17 11:57:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE TxRegInfra PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1853/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TxRegInfra 1.8.0
VJ Carey
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/TxRegInfra
Branch: RELEASE_3_11
Last Commit: c33350e
Last Changed Date: 2020-04-27 15:16:35 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TxRegInfra
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TxRegInfra_1.8.0.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.8.0.zip && rm TxRegInfra_1.8.0.tar.gz TxRegInfra_1.8.0.zip
StartedAt: 2020-10-16 18:44:17 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:45:46 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 89.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TxRegInfra_1.8.0.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.8.0.zip && rm TxRegInfra_1.8.0.tar.gz TxRegInfra_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  342k  100  342k    0     0  5331k      0 --:--:-- --:--:-- --:--:-- 5908k

install for i386

* installing *source* package 'TxRegInfra' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TxRegInfra'
    finding HTML links ... done
    RaggedMongoExpt                         html  
    URL_txregInAWS                          html  
    URL_txregLocal                          html  
    addsyms                                 html  
    basicColData                            html  
    basicFormatter                          html  
    demo_eQTL_granges                       html  
    demo_fimo_granges                       html  
    dgf_meta                                html  
    dnmeta                                  html  
    dnmetaApp                               html  
    getDocumentFields                       html  
    getFieldNames                           html  
    grConverter                             html  
    importBedToMongo                        html  
    listAllCollections                      html  
    makeAggregator                          html  
    makeColData                             html  
    makeGRConverterList                     html  
    oldbasicColData                         html  
    ragged41FP                              html  
    sbov                                    html  
    sbov_output_FP                          html  
    sbov_output_HS                          html  
    sbov_output_eQTL                        html  
    sbov_to_graphNEL                        html  
    txmodels                                html  
    txregCollections                        html  
    verifyHasMongoCmd                       html  
    verifyRunningMongodb                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TxRegInfra' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TxRegInfra' as TxRegInfra_1.8.0.zip
* DONE (TxRegInfra)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'TxRegInfra' successfully unpacked and MD5 sums checked