| Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:55:52 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE Starr PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1743/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Starr 1.44.0 Benedikt Zacher
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | ERROR | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK |
| Package: Starr |
| Version: 1.44.0 |
| Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL Starr |
| StartedAt: 2020-10-16 16:21:09 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 16:21:31 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 21.9 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL Starr ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’ * installing *source* package ‘Starr’ ... ** using staged installation creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for main in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes updating cache ./config.cache creating ./config.status creating src/Makevars ** libs gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -fpic -g -O2 -Wall -c ahocorasick.c -o ahocorasick.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -fpic -g -O2 -Wall -c collect.c -o collect.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -fpic -g -O2 -Wall -c rm_small_peak.c -o rm_small_peak.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -fpic -g -O2 -Wall -c sort_by_genomic.c -o sort_by_genomic.o gcc -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o Starr.so ahocorasick.o collect.o rm_small_peak.o sort_by_genomic.o -lz -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-Starr/00new/Starr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Starr)