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INSTALL report for Rmmquant on tokay2

This page was generated on 2020-10-17 11:57:39 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE Rmmquant PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1503/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rmmquant 1.6.0
Zytnicki Matthias
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/Rmmquant
Branch: RELEASE_3_11
Last Commit: 55dad12
Last Changed Date: 2020-04-27 15:17:24 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Rmmquant
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Rmmquant_1.6.0.tar.gz && rm -rf Rmmquant.buildbin-libdir && mkdir Rmmquant.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rmmquant.buildbin-libdir Rmmquant_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Rmmquant_1.6.0.zip && rm Rmmquant_1.6.0.tar.gz Rmmquant_1.6.0.zip
StartedAt: 2020-10-16 19:26:36 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:28:39 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 122.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Rmmquant_1.6.0.tar.gz && rm -rf Rmmquant.buildbin-libdir && mkdir Rmmquant.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rmmquant.buildbin-libdir Rmmquant_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Rmmquant_1.6.0.zip && rm Rmmquant_1.6.0.tar.gz Rmmquant_1.6.0.zip
###
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install for i386

* installing *source* package 'Rmmquant' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c mmquant_wrapper.cpp -o mmquant_wrapper.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o Rmmquant.dll tmp.def RcppExports.o mmquant_wrapper.o -lz -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/Rmmquant.buildbin-libdir/00LOCK-Rmmquant/00new/Rmmquant/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Rmmquant'
    finding HTML links ... done
    Rmmquant                                html  
    RmmquantClass-class                     html  
    RmmquantClassExample                    html  
    RmmquantExample                         html  
    RmmquantRun                             html  
    counts-method                           html  
    show-RmmquantClass-method               html  
    validateRmmquant                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Rmmquant' ...
** libs
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c mmquant_wrapper.cpp -o mmquant_wrapper.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o Rmmquant.dll tmp.def RcppExports.o mmquant_wrapper.o -lz -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/Rmmquant.buildbin-libdir/Rmmquant/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Rmmquant' as Rmmquant_1.6.0.zip
* DONE (Rmmquant)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Rmmquant' successfully unpacked and MD5 sums checked