Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

INSTALL report for Pigengene on tokay2

This page was generated on 2020-10-17 11:57:24 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE Pigengene PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1314/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Pigengene 1.14.0
Habil Zare
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/Pigengene
Branch: RELEASE_3_11
Last Commit: 894dcda
Last Changed Date: 2020-04-27 14:57:53 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: Pigengene
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Pigengene_1.14.0.tar.gz && rm -rf Pigengene.buildbin-libdir && mkdir Pigengene.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pigengene.buildbin-libdir Pigengene_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Pigengene_1.14.0.zip && rm Pigengene_1.14.0.tar.gz Pigengene_1.14.0.zip
StartedAt: 2020-10-16 17:58:35 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:59:48 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 72.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Pigengene_1.14.0.tar.gz && rm -rf Pigengene.buildbin-libdir && mkdir Pigengene.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pigengene.buildbin-libdir Pigengene_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Pigengene_1.14.0.zip && rm Pigengene_1.14.0.tar.gz Pigengene_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 2462k    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2462k  100 2462k    0     0  3033k      0 --:--:-- --:--:-- --:--:-- 3058k

install for i386

* installing *source* package 'Pigengene' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Pigengene'
    finding HTML links ... done
    Pigengene-package                       html  
    aml                                     html  
    balance                                 html  
    calculate.beta                          html  
    check.nas                               html  
    check.pigengene.input                   html  
    combine.networks                        html  
    compact.tree                            html  
    compute.pigengene                       html  
    dcor.matrix                             html  
    draw.bn                                 html  
    eigengenes33                            html  
    gene.mapping                            html  
    get.fitted.leaf                         html  
    get.genes                               html  
    get.used.features                       html  
    learn.bn                                html  
    make.decision.tree                      html  
    mds                                     html  
    message.if                              html  
    module.heatmap                          html  
    one.step.pigengene                      html  
    pheatmap.type                           html  
    pigengene-class                         html  
    pigengene                               html  
    plot.pigengene                          html  
    preds.at                                html  
    project.eigen                           html  
    pvalues.manova                          html  
    save.if                                 html  
    wgcna.one.step                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Pigengene' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Pigengene' as Pigengene_1.14.0.zip
* DONE (Pigengene)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Pigengene' successfully unpacked and MD5 sums checked