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INSTALL report for NoRCE on tokay2

This page was generated on 2020-10-17 11:57:17 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE NoRCE PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1199/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NoRCE 1.0.0
Gulden Olgun
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/NoRCE
Branch: RELEASE_3_11
Last Commit: bda1f3d
Last Changed Date: 2020-04-27 15:34:50 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: NoRCE
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/NoRCE_1.0.0.tar.gz && rm -rf NoRCE.buildbin-libdir && mkdir NoRCE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NoRCE.buildbin-libdir NoRCE_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL NoRCE_1.0.0.zip && rm NoRCE_1.0.0.tar.gz NoRCE_1.0.0.zip
StartedAt: 2020-10-16 19:20:57 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:22:43 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 105.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/NoRCE_1.0.0.tar.gz && rm -rf NoRCE.buildbin-libdir && mkdir NoRCE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NoRCE.buildbin-libdir NoRCE_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL NoRCE_1.0.0.zip && rm NoRCE_1.0.0.tar.gz NoRCE_1.0.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1646k  100 1646k    0     0  20.4M      0 --:--:-- --:--:-- --:--:-- 22.3M

install for i386

* installing *source* package 'NoRCE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NoRCE'
    finding HTML links ... done
    KeggEnrichment                          html  
    NoRCE-class                             html  
    WikiEnrichment                          html  
    annGO                                   html  
    assembly                                html  
    brain_disorder_ncRNA                    html  
    brain_mirna                             html  
    breastmRNA                              html  
    calculateCorr                           html  
    convertGMT                              html  
    convertGeneID                           html  
    corrbased                               html  
    corrbasedMrna                           html  
    createNetwork                           html  
    drawDotPlot                             html  
    extractBiotype                          html  
    filterBiotype                           html  
    geneGOEnricher                          html  
    genePathwayEnricher                     html  
    geneRegionGOEnricher                    html  
    geneRegionPathwayEnricher               html  
    getGoDag                                html  
    getKeggDiagram                          html  
    getNearToExon                           html  
    getNearToIntron                         html  
    getReactomeDiagram                      html  
    getTADOverlap                           html  
    getUCSC                                 html  
    getmiRNACount                           html  
    goEnrichment                            html  
    listTAD                                 html  
    mirna                                   html  
    mirnaGOEnricher                         html  
    mirnaPathwayEnricher                    html  
    mirnaRegionGOEnricher                   html  
    mirnaRegionPathwayEnricher              html  
    mrna                                    html  
    ncRegion                                html  
    packageCheck                            html  
    pathwayEnrichment                       html  
    predictmiTargets                        html  
    reactomeEnrichment                      html  
    setParameters                           html  
    tad_dmel                                html  
    tad_hg19                                html  
    tad_hg38                                html  
    tad_mm10                                html  
    topEnrichment                           html  
    writeEnrichment                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'NoRCE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NoRCE' as NoRCE_1.0.0.zip
* DONE (NoRCE)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'NoRCE' successfully unpacked and MD5 sums checked