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INSTALL report for ImpulseDE2 on tokay2

This page was generated on 2020-10-17 11:56:52 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ImpulseDE2 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 873/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ImpulseDE2 1.12.0
David S Fischer
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/ImpulseDE2
Branch: RELEASE_3_11
Last Commit: 91c9d49
Last Changed Date: 2020-04-27 15:07:13 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: ImpulseDE2
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ImpulseDE2_1.12.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.12.0.zip && rm ImpulseDE2_1.12.0.tar.gz ImpulseDE2_1.12.0.zip
StartedAt: 2020-10-16 18:29:31 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:31:27 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 116.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ImpulseDE2_1.12.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.12.0.zip && rm ImpulseDE2_1.12.0.tar.gz ImpulseDE2_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 58597  100 58597    0     0   903k      0 --:--:-- --:--:-- --:--:-- 1021k

install for i386

* installing *source* package 'ImpulseDE2' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ImpulseDE2'
    finding HTML links ... done
    ImpulseDE2Object-class                  html  
    append_strReport                        html  
    computeNormConst                        html  
    computeSizeFactors                      html  
    estimateImpulseParam                    html  
    estimateSigmoidParam                    html  
    evalImpulse                             html  
    evalImpulse_comp                        html  
    evalLogLikImpulse                       html  
    evalLogLikImpulse_comp                  html  
    evalLogLikMu                            html  
    evalLogLikMu_comp                       html  
    evalLogLikSigmoid                       html  
    evalLogLikSigmoid_comp                  html  
    evalSigmoid                             html  
    evalSigmoid_comp                        html  
    fitConstImpulse                         html  
    fitConstImpulseGene                     html  
    fitConstModel                           html  
    fitImpulseModel                         html  
    fitModels                               html  
    fitSigmoidGene                          html  
    fitSigmoidModel                         html  
    fitSigmoidModels                        html  
    get_accessors                           html  
    list_accession                          html  
    plotGenes                               html  
    plotHeatmap                             html  
    processData                             html  
    runDEAnalysis                           html  
    runDESeq2                               html  
    runImpulseDE2                           html  
    set_accessors                           html  
    simulateDataSetImpulseDE2               html  
    updateDEAnalysis                        html  
    writeReportToFile                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ImpulseDE2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ImpulseDE2' as ImpulseDE2_1.12.0.zip
* DONE (ImpulseDE2)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'ImpulseDE2' successfully unpacked and MD5 sums checked