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INSTALL report for IPPD on tokay2

This page was generated on 2020-10-17 11:56:54 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE IPPD PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 893/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IPPD 1.36.0
Martin Slawski
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/IPPD
Branch: RELEASE_3_11
Last Commit: 0a5e1c5
Last Changed Date: 2020-04-27 14:23:44 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: IPPD
Version: 1.36.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/IPPD_1.36.0.tar.gz && rm -rf IPPD.buildbin-libdir && mkdir IPPD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPPD.buildbin-libdir IPPD_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL IPPD_1.36.0.zip && rm IPPD_1.36.0.tar.gz IPPD_1.36.0.zip
StartedAt: 2020-10-16 17:05:26 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:06:04 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 38.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/IPPD_1.36.0.tar.gz && rm -rf IPPD.buildbin-libdir && mkdir IPPD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPPD.buildbin-libdir IPPD_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL IPPD_1.36.0.zip && rm IPPD_1.36.0.tar.gz IPPD_1.36.0.zip
###
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100 1049k  100 1049k    0     0  14.0M      0 --:--:-- --:--:-- --:--:-- 15.5M

install for i386

* installing *source* package 'IPPD' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:17:40: warning: missing braces around initializer [-Wmissing-braces]
 static const R_CMethodDef cmethods[] = {
                                        ^
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o IPPD.dll tmp.def R_init_IPPD.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/IPPD.buildbin-libdir/00LOCK-IPPD/00new/IPPD/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IPPD'
    finding HTML links ... done
    IPPD-package                            html  
    analyzeLCMS                             html  
    fitModelParameters                      html  
    getPeaklist                             html  
    internals                               html  
    modelfit-class                          html  
    myo500                                  html  
    peaklist-class                          html  
    read.mzXML                              html  
    sweepline                               html  
    toyspectrum                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'IPPD' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'IPPD' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'IPPD' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:17:40: warning: missing braces around initializer [-Wmissing-braces]
 static const R_CMethodDef cmethods[] = {
                                        ^
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o IPPD.dll tmp.def R_init_IPPD.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/x64
** testing if installed package can be loaded
Warning: Package 'IPPD' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'IPPD' as IPPD_1.36.0.zip
* DONE (IPPD)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'IPPD' successfully unpacked and MD5 sums checked