Back to Multiple platform build/check report for BioC 3.11
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

INSTALL report for GCSscore on tokay2

This page was generated on 2020-10-17 11:56:37 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE GCSscore PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 664/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GCSscore 1.2.0
Guy M. Harris
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/GCSscore
Branch: RELEASE_3_11
Last Commit: 7dfabcc
Last Changed Date: 2020-04-27 15:32:15 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GCSscore
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GCSscore_1.2.0.tar.gz && rm -rf GCSscore.buildbin-libdir && mkdir GCSscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GCSscore.buildbin-libdir GCSscore_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GCSscore_1.2.0.zip && rm GCSscore_1.2.0.tar.gz GCSscore_1.2.0.zip
StartedAt: 2020-10-16 17:45:32 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:46:50 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 78.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GCSscore_1.2.0.tar.gz && rm -rf GCSscore.buildbin-libdir && mkdir GCSscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GCSscore.buildbin-libdir GCSscore_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GCSscore_1.2.0.zip && rm GCSscore_1.2.0.tar.gz GCSscore_1.2.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4376k  100 4376k    0     0  33.1M      0 --:--:-- --:--:-- --:--:-- 34.7M

install for i386

* installing *source* package 'GCSscore' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GCSscore'
    finding HTML links ... done
    GCSscore                                html  
    calcSF                                  html  
    computeSscore                           html  
    get3primeIVTprobefileData               html  
    getClariomSprobefileData                html  
    getXTAprobefileData                     html  
    mismatch                                html  
    normalize                               html  
    rawScore                                html  
    zoneRQ                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GCSscore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GCSscore' as GCSscore_1.2.0.zip
* DONE (GCSscore)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'GCSscore' successfully unpacked and MD5 sums checked