Back to Multiple platform build/check report for BioC 3.11
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for CNTools on malbec2

This page was generated on 2020-10-17 11:54:35 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE CNTools PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 334/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNTools 1.44.0
J. Zhang
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/CNTools
Branch: RELEASE_3_11
Last Commit: 0322d74
Last Changed Date: 2020-04-27 14:19:27 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CNTools
Version: 1.44.0
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL CNTools
StartedAt: 2020-10-16 16:19:02 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 16:19:18 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 15.8 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL CNTools
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’
* installing *source* package ‘CNTools’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c getratios.c -o getratios.o
gcc -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o CNTools.so getratios.o -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-CNTools/00new/CNTools/libs
** R
** data
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘start’ in package ‘CNTools’
Creating a new generic function for ‘end’ in package ‘CNTools’
Creating a generic function for ‘genefilter’ from package ‘genefilter’ in package ‘CNTools’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNTools)