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INSTALL report for minet on tokay1

This page was generated on 2020-04-15 12:18:29 -0400 (Wed, 15 Apr 2020).

Package 1046/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
minet 3.44.1
Patrick E. Meyer
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/minet
Branch: RELEASE_3_10
Last Commit: 728eb77
Last Changed Date: 2020-02-03 13:00:09 -0400 (Mon, 03 Feb 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: minet
Version: 3.44.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/minet_3.44.1.tar.gz && rm -rf minet.buildbin-libdir && mkdir minet.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=minet.buildbin-libdir minet_3.44.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL minet_3.44.1.zip && rm minet_3.44.1.tar.gz minet_3.44.1.zip
StartedAt: 2020-04-14 18:56:26 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 18:56:52 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 25.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/minet_3.44.1.tar.gz && rm -rf minet.buildbin-libdir && mkdir minet.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=minet.buildbin-libdir minet_3.44.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL minet_3.44.1.zip && rm minet_3.44.1.tar.gz minet_3.44.1.zip
###
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100 50436  100 50436    0     0   928k      0 --:--:-- --:--:-- --:--:-- 1005k

install for i386

* installing *source* package 'minet' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c aracne.cpp -o aracne.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c clr.cpp -o clr.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c minet.cpp -o minet.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c mrnet.cpp -o mrnet.o
mrnet.cpp: In function 'SEXPREC* mrnet(SEXP, SEXP)':
mrnet.cpp:190:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
                   for( int l=0; l<n; ++l )  
                                  ^
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o minet.dll tmp.def aracne.o clr.o minet.o mrnet.o validate.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/minet.buildbin-libdir/00LOCK-minet/00new/minet/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'minet'
    finding HTML links ... done
    aracne                                  html  
    build.mim                               html  
    clr                                     html  
    minet                                   html  
    mrnet                                   html  
    mrnetb                                  html  
    syn.data                                html  
    syn.net                                 html  
    validate                                html  
    vis.res                                 html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'minet' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c aracne.cpp -o aracne.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c clr.cpp -o clr.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c minet.cpp -o minet.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c mrnet.cpp -o mrnet.o
mrnet.cpp: In function 'SEXPREC* mrnet(SEXP, SEXP)':
mrnet.cpp:190:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
                   for( int l=0; l<n; ++l )  
                                  ^
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o minet.dll tmp.def aracne.o clr.o minet.o mrnet.o validate.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/minet.buildbin-libdir/minet/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'minet' as minet_3.44.1.zip
* DONE (minet)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'minet' successfully unpacked and MD5 sums checked