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INSTALL report for lipidr on tokay1

This page was generated on 2020-04-15 12:32:21 -0400 (Wed, 15 Apr 2020).

Package 910/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lipidr 2.0.0
Ahmed Mohamed
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/lipidr
Branch: RELEASE_3_10
Last Commit: 36bb416
Last Changed Date: 2019-10-29 13:11:39 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: lipidr
Version: 2.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/lipidr_2.0.0.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL lipidr_2.0.0.zip && rm lipidr_2.0.0.tar.gz lipidr_2.0.0.zip
StartedAt: 2020-04-14 20:21:51 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 20:22:38 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 47.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/lipidr_2.0.0.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL lipidr_2.0.0.zip && rm lipidr_2.0.0.tar.gz lipidr_2.0.0.zip
###
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100 1119k  100 1119k    0     0  3626k      0 --:--:-- --:--:-- --:--:-- 3684k

install for i386

* installing *source* package 'lipidr' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'lipidr'
    finding HTML links ... done
    LipidomicsExperiment-class              html  
    LipidomicsExperiment                    html  
    finding level-2 HTML links ... done

    add_sample_annotation                   html  
    annotate_lipids                         html  
    as_lipidomics_experiment                html  
    data_normalized                         html  
    de_analysis                             html  
    filter_by_cv                            html  
    gen_lipidsets                           html  
    lipidDefaults                           html  
    lipidnames_pattern                      html  
    lipidr-data                             html  
    lipidr-package                          html  
    lsea                                    html  
    mva                                     html  
    mw                                      html  
    non_parsed_molecules                    html  
    normalize_istd                          html  
    normalize_pqn                           html  
    pipe                                    html  
    plot_chain_distribution                 html  
    plot_heatmap                            html  
    plot_lipidclass                         html  
    plot_molecules                          html  
    plot_samples                            html  
    plot_trend                              html  
    read_skyline                            html  
    remove_non_parsed_molecules             html  
    set_attr                                html  
    summarize_transitions                   html  
    update_molecule_names                   html  
    use_interactive_graphics                html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'lipidr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'lipidr' as lipidr_2.0.0.zip
* DONE (lipidr)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'lipidr' successfully unpacked and MD5 sums checked