Leonardo Collado-Torres
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/derfinder |
| Branch: RELEASE_3_10 |
| Last Commit: 8f18959 |
| Last Changed Date: 2019-10-29 13:09:04 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:23:46 -0400 (Wed, 15 Apr 2020).
| Package 439/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| derfinder 1.20.0 Leonardo Collado-Torres
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: derfinder |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/derfinder_1.20.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL derfinder_1.20.0.zip && rm derfinder_1.20.0.tar.gz derfinder_1.20.0.zip |
| StartedAt: 2020-04-14 20:33:35 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:34:40 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 65.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/derfinder_1.20.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL derfinder_1.20.0.zip && rm derfinder_1.20.0.tar.gz derfinder_1.20.0.zip
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install for i386
* installing *source* package 'derfinder' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'derfinder'
finding HTML links ... done
analyzeChr html
annotateRegions html
calculatePvalues html
calculateStats html
coerceGR html
collapseFullCoverage html
coverageToExon html
createBw html
createBwSample html
define_cluster html
derfinder-deprecated html
derfinder-package html
extendedMapSeqlevels html
filterData html
findRegions html
fullCoverage html
genomeData html
genomeDataRaw html
genomeFstats html
genomeInfo html
genomeRegions html
genomicState html
getRegionCoverage html
getTotalMapped html
loadCoverage html
makeGenomicState html
makeModels html
mergeResults html
preprocessCoverage html
railMatrix html
rawFiles html
regionMatrix html
sampleDepth html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'derfinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'derfinder' as derfinder_1.20.0.zip
* DONE (derfinder)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'derfinder' successfully unpacked and MD5 sums checked