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INSTALL report for XINA on tokay1

This page was generated on 2020-04-15 12:31:03 -0400 (Wed, 15 Apr 2020).

Package 1813/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
XINA 1.4.0
Lang Ho Lee and Sasha A. Singh
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/XINA
Branch: RELEASE_3_10
Last Commit: 3c704e6
Last Changed Date: 2019-10-29 13:11:20 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: XINA
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/XINA_1.4.0.tar.gz && rm -rf XINA.buildbin-libdir && mkdir XINA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XINA.buildbin-libdir XINA_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL XINA_1.4.0.zip && rm XINA_1.4.0.tar.gz XINA_1.4.0.zip
StartedAt: 2020-04-14 19:02:42 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:03:36 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 53.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/XINA_1.4.0.tar.gz && rm -rf XINA.buildbin-libdir && mkdir XINA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XINA.buildbin-libdir XINA_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL XINA_1.4.0.zip && rm XINA_1.4.0.tar.gz XINA_1.4.0.zip
###
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100  636k  100  636k    0     0  7686k      0 --:--:-- --:--:-- --:--:-- 8062k

install for i386

* installing *source* package 'XINA' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'XINA'
    finding HTML links ... done
    add_legend                              html  
    alluvial_enriched                       html  
    alluvial_enrichment_tests               html  
    calculate_centrality_scores             html  
    default_size                            html  
    draw_alluvial_plot                      html  
    example_clusters                        html  
    extract_data_column                     html  
    find_similar_clusters                   html  
    generate_count_table                    html  
    generate_superset                       html  
    get_color_for_nodes                     html  
    get_colors                              html  
    get_comigrations_by_name                html  
    get_condition_biased_comigrations       html  
    get_layout                              html  
    get_mTOR_proteins                       html  
    get_random_data                         html  
    get_stats                               html  
    get_theme_blank                         html  
    get_unknown_ppi_nodes                   html  
    gn                                      html  
    gn_desc                                 html  
    hprd_ppi                                html  
    length2                                 html  
    load_previous_results                   html  
    make_random_xina_data                   html  
    mutate_colors                           html  
    organize_clusters                       html  
    plot_NA                                 html  
    plot_clusters                           html  
    plot_clusters_all                       html  
    plot_condition_compositions             html  
    plot_enrichment_results                 html  
    rank_centrality                         html  
    string_example                          html  
    xina_analysis                           html  
    xina_clustering                         html  
    xina_enrichment                         html  
    xina_plot_all                           html  
    xina_plot_bycluster                     html  
    xina_plot_single                        html  
    xina_result_example                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'XINA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'XINA' as XINA_1.4.0.zip
* DONE (XINA)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'XINA' successfully unpacked and MD5 sums checked