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INSTALL report for TnT on tokay1

This page was generated on 2020-04-15 12:29:17 -0400 (Wed, 15 Apr 2020).

Package 1732/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TnT 1.8.1
Jialin Ma
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/TnT
Branch: RELEASE_3_10
Last Commit: cd8a55d
Last Changed Date: 2020-01-30 02:08:12 -0400 (Thu, 30 Jan 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TnT
Version: 1.8.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TnT_1.8.1.tar.gz && rm -rf TnT.buildbin-libdir && mkdir TnT.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TnT.buildbin-libdir TnT_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TnT_1.8.1.zip && rm TnT_1.8.1.tar.gz TnT_1.8.1.zip
StartedAt: 2020-04-14 19:32:14 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:32:51 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 36.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TnT_1.8.1.tar.gz && rm -rf TnT.buildbin-libdir && mkdir TnT.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TnT.buildbin-libdir TnT_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TnT_1.8.1.zip && rm TnT_1.8.1.tar.gz TnT_1.8.1.zip
###
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100  130k  100  130k    0     0   710k      0 --:--:-- --:--:-- --:--:--  726k

install for i386

* installing *source* package 'TnT' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TnT'
    finding HTML links ... done
    TnT-shiny                               html  
    composite-track                         html  
    knit_print.TnTBoard                     html  
    mapcol                                  html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpqiDNWg/R.INSTALL19fc4344b7e/TnT/man/mapcol.Rd:13: file link 'terrain.colors' in package 'grDevices' does not exist and so has been treated as a topic
    range-TnTBoard-method                   html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpqiDNWg/R.INSTALL19fc4344b7e/TnT/man/range-TnTBoard-method.Rd:12: file link 'range,GenomicRanges-method' in package 'GenomicRanges' does not exist and so has been treated as a topic
    range-TnTTrack                          html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpqiDNWg/R.INSTALL19fc4344b7e/TnT/man/range-TnTTrack.Rd:16: file link 'range,GenomicRanges-method' in package 'GenomicRanges' does not exist and so has been treated as a topic
    saveTnT                                 html  
    seqinfo                                 html  
    strandlabel                             html  
    tntboard                                html  
    tooltip                                 html  
    track-constructors                      html  
    trackSpec                               html  
    trackWidget                             html  
    trackdata                               html  
    tracklist                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TnT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TnT' as TnT_1.8.1.zip
* DONE (TnT)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'TnT' successfully unpacked and MD5 sums checked