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INSTALL report for TFEA.ChIP on tokay1

This page was generated on 2020-04-15 12:29:38 -0400 (Wed, 15 Apr 2020).

Package 1718/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TFEA.ChIP 1.6.0
Laura Puente SantamarĂ­a
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/TFEA.ChIP
Branch: RELEASE_3_10
Last Commit: 7319820
Last Changed Date: 2019-10-29 13:10:56 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TFEA.ChIP
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TFEA.ChIP_1.6.0.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.6.0.zip && rm TFEA.ChIP_1.6.0.tar.gz TFEA.ChIP_1.6.0.zip
StartedAt: 2020-04-14 19:53:51 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:55:02 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 71.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TFEA.ChIP_1.6.0.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.6.0.zip && rm TFEA.ChIP_1.6.0.tar.gz TFEA.ChIP_1.6.0.zip
###
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install for i386

* installing *source* package 'TFEA.ChIP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TFEA.ChIP'
    finding HTML links ... done
    ARNT.metadata                           html  
    ARNT.peaks.bed                          html  
    CM_list                                 html  
    DnaseHS_db                              html  
    Entrez.gene.IDs                         html  
    GR2tfbs_db                              html  
    GSEA.result                             html  
    GSEA_ESpermutations                     html  
    GSEA_EnrichmentScore                    html  
    GSEA_run                                html  
    GeneID2entrez                           html  
    Genes.Upreg                             html  
    Mat01                                   html  
    MetaData                                html  
    Select_genes                            html  
    contingency_matrix                      html  
    getCMstats                              html  
    get_LFC_bar                             html  
    get_chip_index                          html  
    gr.list                                 html  
    highlight_TF                            html  
    hypoxia                                 html  
    hypoxia_DESeq                           html  
    log2.FC                                 html  
    makeTFBSmatrix                          html  
    plot_CM                                 html  
    plot_ES                                 html  
    plot_RES                                html  
    preprocessInputData                     html  
    rankTFs                                 html  
    set_user_data                           html  
    stat_mat                                html  
    tfbs.database                           html  
    txt2GR                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TFEA.ChIP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TFEA.ChIP' as TFEA.ChIP_1.6.0.zip
* DONE (TFEA.ChIP)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'TFEA.ChIP' successfully unpacked and MD5 sums checked